Methylocaldum szegediense: MSZNOR_3854
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Entry
MSZNOR_3854 CDS
T09668
Symbol
birA
Name
(GenBank) Bifunctional ligase/repressor BirA
KO
K03524
BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:
6.3.4.15
]
Organism
msze
Methylocaldum szegediense
Pathway
msze00780
Biotin metabolism
msze01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
msze00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
MSZNOR_3854 (birA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msze03000
]
MSZNOR_3854 (birA)
Enzymes [BR:
msze01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
MSZNOR_3854 (birA)
Transcription factors [BR:
msze03000
]
Prokaryotic type
Helix-turn-helix
Other families
MSZNOR_3854 (birA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPL_LplA_LipB
HTH_11
BPL_C
HTH_24
HTH_AsnC-type
BPL_LplA_LipB_2
MarR
MarR_2
HTH_23
TrmB
GntR
Motif
Other DBs
NCBI-ProteinID:
CAI8921751
UniProt:
A0ABM9I6D9
LinkDB
All DBs
Position
MSZNORmain:3740265..3741254
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AA seq
329 aa
AA seq
DB search
MQYDELTKTLLHVLSDNGFHSGTELAGRLGISRTAVWKAVRALELRGIEIAALPGRGYRV
VQPLELLNETAIRAALKPEVACLLSALHVYDELDSTNTHLMRLAAERAPSGVVCLAETQT
AGKGRIGRTWLSPLGANVYLSVLWRYDDHALIAGLSLAVGVAVIRALEKCGVVGVGLKWP
NDLLWEGRKLGGILLEASGEAHGGCAVVVGLGINRYIPSAVGREIDQAWVDLSTVAGESA
PSRNRLIASILNELLPLLNDYQHTGLRHYLPEWRRYHHLNGREVIVRQGDIETVGTVADI
TEEGLLVLTCKDGKRREFASGDVQLRVVG
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcaatacgatgagctgaccaagaccctgcttcatgtgttgtccgacaatggctttcac
tcgggaacggagctggcgggccgtcttggtatcagtaggacggccgtgtggaaagctgtg
cgtgccttggagctccgcggaatcgaaatcgccgccttgccgggcagagggtaccgggta
gtgcagcccctggagctgctcaacgaaacagccattcgtgccgctctgaaacccgaggtc
gcgtgcctgcttagcgcgctacacgtttacgacgaactcgactcgaccaacacgcatttg
atgcgcctggccgcagaaagagccccttcgggcgtggtttgcctcgctgaaacgcaaacg
gccggtaagggacgaattggtcgcacttggctttcgcccctgggagccaacgtttatctc
tcggtcctgtggcgttacgacgatcacgctttgatagccggtcttagcttagccgtcggc
gtggcggtgattcgggcactggaaaaatgcggtgtcgtcggagtcggactcaaatggcca
aacgatcttttgtgggaaggccgcaagctagggggaatcctgctggaggcgagcggggag
gcccatggtggatgtgcggtggtcgtgggcttggggataaaccgctatataccctccgcc
gtggggcgcgagatcgatcaggcatgggtcgatctctctaccgtggcgggagaatccgcc
ccgtcgaggaaccgcctgatcgcctcgattctgaacgaattgctgccattattgaacgat
taccagcataccgggctccggcattatcttccggagtggcgccgctatcatcatctgaac
ggccgcgaggtgatcgtccgccaaggcgacattgaaaccgtcggcacggtcgcggatatt
accgaagaaggactgctcgtcctaacgtgcaaggacggaaaacgccgagagttcgcatcc
ggcgatgtgcagctccgcgtcgttgggtaa
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