Methylocaldum szegediense: MSZNOR_3979
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Entry
MSZNOR_3979 CDS
T09668
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
msze
Methylocaldum szegediense
Brite
KEGG Orthology (KO) [BR:
msze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msze03016
]
MSZNOR_3979
Enzymes [BR:
msze01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
MSZNOR_3979
Transfer RNA biogenesis [BR:
msze03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
MSZNOR_3979
Prokaryotic type
MSZNOR_3979
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
CAI8928125
UniProt:
A0ABN8XAL9
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All DBs
Position
MSZNORmain:complement(3856412..3857410)
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AA seq
332 aa
AA seq
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MKPVFHPALVNDVFGDPAVYVDFLFEKRALLFDLGDLRNLATRKILKVRDIFVSHAHMDH
FFGFDWLLRLCLGRDIRIRLFGPAGFLGQVEAKLAGYTWNLVENYDTDFTLDVTEILSET
EARSARFRCQSGFRRENGYEWTIRDCVLLDEENLTVRFSLLDHKIPCLAFALQEKLHVNI
RKNRLNEMKLEPGPWLQGFKHAVLAGLPGDTPIVARRQGGGEMTYCLDDLAGTIAHISTG
QKIAYVTDAIYHEANAERIVRLATGADQFFIEAVFGDALTERAAQKYHLTARQAGSLARR
AAVKFPVPFHFSPIYHDREYELREEFEQAFRG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctgtgttccaccccgcgctggtgaacgatgttttcggcgatccggcggtttat
gtagatttcttattcgaaaagcgcgccttgctgttcgatctgggtgatttgcggaatctg
gcgacgcggaaaatcctcaaggtacgcgacatctttgtttcccatgcgcacatggaccat
ttcttcgggttcgattggctgctgcgcctgtgcctcggtcgcgacatccgcatccgtttg
ttcgggccggccggttttctcggtcaggtggaagccaagcttgcgggttatacctggaat
ctggtggaaaactacgacaccgatttcaccctagacgtgaccgagattttgagcgaaacc
gaggcgcgcagcgcccgtttccgttgccaaagcggctttcgccgcgaaaacggctacgaa
tggaccattcgcgactgtgtgctgcttgacgaggaaaatctcacggtgcggttcagccta
ttggatcacaaaatcccgtgtctcgcgtttgcgctccaagaaaagctgcacgtcaatatc
cgaaagaaccgcctgaacgagatgaagctggagcccggtccttggcttcagggtttcaag
cacgccgtgctcgcgggcctacccggtgatacgccgatcgtcgcgaggcgtcaggggggc
ggcgagatgacgtattgcctggacgatctcgctggaaccatcgctcacatctccaccgga
cagaaaatcgcttacgtgaccgatgccatatatcacgaggccaacgccgaacgcatcgtt
cgcttggcgacgggcgccgaccagtttttcatcgaagcggtgttcggcgacgcgcttacc
gaacgcgccgcgcagaaataccacctgaccgctcgccaggcaggaagcctagctcgccgt
gccgccgtcaaattcccggtgccgtttcatttctcgccgatctaccacgaccgcgaatac
gagcttagggaagaattcgagcaagcgtttcgcggctga
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