Methylocaldum szegediense: MSZNOR_4213
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Entry
MSZNOR_4213 CDS
T09668
Symbol
hemB
Name
(GenBank) Delta-aminolevulinic acid dehydratase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
msze
Methylocaldum szegediense
Pathway
msze00860
Porphyrin metabolism
msze01100
Metabolic pathways
msze01110
Biosynthesis of secondary metabolites
msze01120
Microbial metabolism in diverse environments
msze01240
Biosynthesis of cofactors
Module
msze_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
msze_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
msze00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
MSZNOR_4213 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msze04147
]
MSZNOR_4213 (hemB)
Enzymes [BR:
msze01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
MSZNOR_4213 (hemB)
Exosome [BR:
msze04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
MSZNOR_4213 (hemB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
CAI8939658
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All DBs
Position
MSZNORmain:complement(4084982..4085962)
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AA seq
326 aa
AA seq
DB search
MRQYEFCRRLIRETRLSADDLIYPLFVLEGENRREPVASMPGIERLSIDLILKECETAYR
LGIPAIALFPVTSPEKKTDDAREAYNPAGLVQRAVRMLKRHLPELGVITDVALDPFTTHG
QDGLVDQEGYVVNDETVEVLVRQAMSHAEAGADVVAPSDMMDGRVGAIRCALEAKGFVHT
RILAYSAKYASAFYGPFRDAVGSAANLGSGNKYTYQMDPANSDEALREVELDLAEGADMV
MVKPGLPYLDIIRRVKDRFGVPTFAYQVSGEYAMLKAAAQNGWLDERKTVLESLLALKRA
GADAILTYYAKTVAEWIREDAIGSGS
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgaggcaatacgaattctgtcggcgcctcattcgagaaacgcgactttccgccgatgac
ttgatttatcccctttttgttttggaaggcgagaatcggcgggaaccggttgcgtccatg
cccggcattgaacggctgagcatcgatcttatattaaaggagtgcgaaacggcttaccgg
ctcggaattcctgccatcgctttgttccccgtaacgtccccggaaaagaaaacggacgat
gcacgcgaggcttataaccctgccggtttggtacaacgggccgtacgcatgctgaaacgg
cacttgccggagctaggcgtcattactgacgtcgcattagacccctttacgactcacggc
caagacggcctcgtagaccaggaaggctatgtggtcaacgatgagaccgtcgaggtactt
gtcagacaggcgatgtctcatgccgaagccggtgctgacgtcgtagcgccttcggacatg
atggacggtcgcgttggcgccattcgctgtgcgctggaagcgaaaggattcgtccacacc
cgaattctcgcctattccgccaagtacgcttcagctttctacggaccgtttcgagacgct
gtgggttccgcggccaatctaggcagcggtaacaaatacacgtaccagatggacccagcc
aattcggacgaagccctgcgggaagtcgaactcgatttggcggaaggcgccgacatggtc
atggtcaaaccgggcttaccttatttggacatcatccgccgggtcaaagaccgtttcggc
gtcccgacattcgcctatcaggtcagcggagaatacgccatgctcaaagccgcggcgcaa
aatggctggctcgatgaacggaagacggtgctcgagtctttactggcactcaagcgcgcg
ggagcggatgccatcctgacctattacgccaaaaccgtcgccgaatggattcgggaagat
gcgattggatccgggtcctga
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