Methylocaldum szegediense: MSZNOR_4217
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Entry
MSZNOR_4217 CDS
T09668
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
msze
Methylocaldum szegediense
Brite
KEGG Orthology (KO) [BR:
msze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msze03009
]
MSZNOR_4217 (rimO)
Enzymes [BR:
msze01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
MSZNOR_4217 (rimO)
Ribosome biogenesis [BR:
msze03009
]
Prokaryotic type
ribosomal protein modification factors
MSZNOR_4217 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
YajR_YAM
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
CAI8939881
LinkDB
All DBs
Position
MSZNORmain:4089028..4090344
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AA seq
438 aa
AA seq
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MKTPRIGFVSLGCPKALVDSERILTKLRAEGYSLVPTYQDADLVVVNTCGFIDAAVEESL
EAIGEALRENGKVIVTGCLGVRESEIRARHPQVLKVTGAHAYEEVVEAVHEHLPPLHDPF
VDLLPPEGIKLTPRHYAYLKISEGCNHRCTFCIIPSLRGNLVSRPIGEVMAEAERLVAAG
VKELLVVSQDTSAYGVDLKHRTDFWGGRPLKTRFYDLAKALAELGVWVRMHYVYPYPHVD
DVIPLMAEGKILPYLDIPFQHASARILKLMKRPAAAENILSRIAEWRRICPELVLRSTFI
VGFPGETEADFEQLLAFLQEAQLDRVGCFTYSPVKGAAANNLPDPVPEAVKEERLARFMA
AQAEISASRLQSKIGRRETVLVDEVVEEGAVARSRADAPEIDGQVFIDGATHLKVGDWAE
VIFEEADDHDLWAHLADH
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaccccgtattggttttgtcagccttggatgtccaaaggcgctggtagatagt
gagcgcattttgaccaagctgcgcgccgaaggttatagcctcgttccaacctatcaagac
gccgatcttgttgtcgtaaacacttgcgggttcatcgatgccgcggtcgaggaatcgctg
gaggcaataggcgaggctttgagagagaacggaaaagtcatcgtgacgggttgcctgggc
gttagagagagcgagattcgcgctcgtcatcctcaagtgctgaaagtgacgggagcccat
gcctatgaggaggtcgtcgaggcggtgcatgagcatctgccgccgcttcacgatcccttt
gtcgatctgctgccgccagaaggcattaagctgacgcctcgccattatgcgtacctcaag
atttccgagggctgcaatcatcgctgtacgttctgcatcattccgagcctgcgcggcaat
ctggttagccgccctattggtgaggtgatggctgaggcggaacgcctggtcgcggcaggg
gtgaaggaactgctcgtggtgtctcaggataccagcgcttacggagtcgatttgaagcat
cggaccgacttttggggcgggcgtccgctcaagactcgtttttacgatctggccaaggcc
ttggcggaactcggggtttgggtgcgcatgcactatgtgtacccgtatccgcatgtggat
gacgtcattccgctcatggccgaagggaaaatcctgccgtatctggatattccgttccag
cacgccagtgctcgaattctgaagctgatgaagcgcccggcggcggccgagaatattctg
agccggatcgcagagtggcggagaatatgcccggaactcgtgcttcgcagcacgtttatc
gtcggttttcccggggaaaccgaagccgatttcgagcaactcctcgcttttttgcaggaa
gcgcaactcgatcgggttggctgttttacctattcaccggtcaagggcgcggccgccaac
aatttgcccgatccagtgccagaagccgtgaaggaagaacgtctcgctcggtttatggcg
gcgcaggccgaaatcagcgctagccgactgcaatccaaaattggacggcgggaaacggtt
ctagtcgatgaagtcgtggaagaaggcgcggtcgctcgcagccgggccgatgcgccggag
atcgacggtcaggtgtttatcgacggtgcgactcatctgaaagtcggggactgggcggaa
gtgattttcgaggaagccgatgaccacgatttgtgggcccacctggccgatcattaa
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