Methylocaldum szegediense: MSZNOR_4327
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Entry
MSZNOR_4327 CDS
T09668
Symbol
msbA
Name
(GenBank) ATP-dependent lipid A-core flippase
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
msze
Methylocaldum szegediense
Pathway
msze02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
msze00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
MSZNOR_4327 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msze02000
]
MSZNOR_4327 (msbA)
Enzymes [BR:
msze01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
MSZNOR_4327 (msbA)
Transporters [BR:
msze02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
MSZNOR_4327 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
Zeta_toxin
AAA_22
AAA_16
AAA
DEAD
nSTAND1
ABC_ATPase
AAA_29
AAA_21
NACHT
AAA_25
AAA_5
TsaE
Motif
Other DBs
NCBI-ProteinID:
CAI8945169
LinkDB
All DBs
Position
MSZNORmain:4196856..4198658
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AA seq
600 aa
AA seq
DB search
MSEKHSDRKPLTDGMIIYRRLLKYALPYWKMFLASIVAMIGYASLGPAFAKLIQPLIDGS
FIENDPEILRQAPFVLLGLSIARGIAGFAGDYCSGWVGRRVIADLRRDLFDQLLNLPCTY
YDHASSGQLLAKLLYNTEQVANSLTKGVVAVFKDGLTIVGLTLLMVYENVLLSLVFMVVG
PVLGISIRVVSKRFRKISMRIQESMGNVGHVAQEVIDAQRIVKVFNGKSYEGQKFAKENE
RNQRRQMKLIATDAMSSSIIQLIYVSGFAAILYVVSLDSVRHTITPGSLIAFIAAMAMML
SPIKRVTQVLNIMQKGIAAGDSIFELLDKEREHDSGTQELEAVKGQIEYKGVSLSYREGG
EYALRNIDLTIKPGETIALVGQSGSGKTSLIRLLPRLYEPTQGEIRIDGRDIREFTLSSL
RRHIAYVGQEVTLFNDSIANNIAYGCRESVSFEDVRQAAKTAHALEFIEGLPQGFETVVG
QHGVVLSGGQRQRIAIARAVLKNAPILILDEATSALDAESERHVQEALEVLMKGRTTLVI
AHRLSTIQNADRIYVMRDGRIIESGTHEQLLREQSYYAELHRLQFEHKMPRPIPQVHAMS
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaaacactccgaccgaaagccgcttaccgacggaatgatcatctaccggcgg
ctgctcaaatacgctttaccctactggaagatgtttctggcttcgatcgtggccatgatc
ggctacgcttcgttagggccggctttcgctaagctgattcagccgctcatcgacggcagt
ttcatagaaaatgatcccgagattctgcgccaagcgcctttcgtcttgctgggtctgtcg
atcgcacgcggcattgccgggtttgccggagactattgttccgggtgggtcgggcgacgg
gtgatcgccgatcttcgccgggatttgttcgatcaactcctcaatcttccctgtacctat
tacgatcacgcgtcctcggggcagttacttgccaagctcctgtacaacaccgagcaggtg
gctaattccctgaccaaaggcgtggtcgcggtattcaaggacggcttgaccatcgtcgga
ctgaccttgctgatggtttacgaaaatgtcttgttgtccctggtcttcatggtggtcggc
ccggtgctcggtatcagcattcgcgtcgtcagcaagcgttttcgaaagatcagtatgcgt
attcaggagtccatggggaatgtcggccatgtcgcacaggaggtgatcgatgcccagcgc
attgtcaaggtgttcaacggaaagagttacgagggccagaaattcgcgaaggaaaacgag
cgtaaccagcggcggcagatgaagctgatcgccacggacgcgatgagtagctcgatcatt
cagctcatctatgtcagcggattcgcggcgattctgtacgtggtgtccctggattcggtg
cgtcacaccatcacgcccggtagtctgatcgccttcatcgcagcgatggccatgatgctg
agtccaatcaagcgcgtgacccaggtgctcaatatcatgcagaaaggcattgccgccggg
gacagcatcttcgaattgctggacaaggaacgcgagcacgacagcggaacgcaggaactc
gaagcggtaaaggggcagatcgaatacaagggcgtcagcctctcctatcgagagggagga
gagtacgcgctaaggaatatcgatctgacgataaagcctggcgaaaccatcgccttggta
gggcaatcgggcagcgggaagacctcgctgatacgcttgttgcccaggctttacgaaccg
acccagggcgaaatccgcatcgacgggcgggacatccgggagtttacattgagcagcctg
cgccggcacatcgcatacgtggggcaggaagtcaccttgttcaatgacagcatcgccaac
aatatcgcctatggctgtcgggaatcggtgagcttcgaggacgttcggcaggcagccaag
actgcccatgcgctggaattcatcgaagggttgccgcaaggcttcgaaacagtcgtcggc
cagcacggcgtcgtgctttcgggcgggcagcggcaacgcatcgcgatcgcccgcgccgtg
ctcaagaacgcgcctatcctaatactcgacgaagcgacatcagcgctggacgcagaatcg
gagcgtcatgtccaggaggctttggaggtcttgatgaaaggcagaactaccctggtcatc
gcgcatcgcttgtccaccattcagaacgcggaccgcatctacgttatgcgcgacggccgc
atcatcgaaagcggcactcacgaacaattgttgcgtgagcagtcctattacgcggagctt
caccgtttgcagttcgagcacaagatgcccaggccgattcctcaagttcacgcgatgtct
tag
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