Methylocaldum szegediense: MSZNOR_4459
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Entry
MSZNOR_4459 CDS
T09668
Symbol
yhgF
Name
(GenBank) putative RNA-binding protein YhgF
KO
K06959
protein Tex
Organism
msze
Methylocaldum szegediense
Brite
KEGG Orthology (KO) [BR:
msze00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
MSZNOR_4459 (yhgF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
S1_RRP5
YqgF
HHH_7
HHH_6
RNase_II_C_S1
PsbU
OB_cyt-4
Motif
Other DBs
NCBI-ProteinID:
CAI8951432
UniProt:
A0ABN8XBX4
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Position
MSZNORmain:complement(4319268..4321577)
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AA seq
769 aa
AA seq
DB search
MNIIARIAEELGVRERQVQAAVDLLDEGATVPFIARYRKEATGGLDDTQLRTLEVRLAYL
RELEDRRQTILDSIREQGKLTPELEQAILAADTKTLLEDLYLPYKPKRRTKAQIAREAGL
EPLADALLGDPSLVPESEAEKYVDADKGVPDAAAALEGARQILMERFAEHAGLLADLRER
IWNEGILASTVVEGKEQAGAKFRDYFDFAEPIAKIPSHRALALFRGRNEDVLDLVLKVGK
DEDAAHKAAESLIARTFGIAGKGRPADRWLADTVHYAWKVKILTRIDLDLKQRLREAAEA
EAIQVFAKNLKDLLLAAPAGPRTTMGLDPGLRTGVKVAVVDQTGKLLETATIYPHQPQNQ
WDQSIATLARMIAQYEVELVAIGNGTASRETDQLVGDLIKRHPELHITKVMVSEAGASVY
SASELAAKEFPDLDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVNQSQLAKSL
DAVVEDCVNAVGVDVNTASVSLLRYVSGLSQTISQNIVEYRNRNGAFNSREELKKVPRLG
EKTFEQAAGFLRIMNGTNPLDASAVHPEAYPVVERIIRDTGKDIRELIGNAAFLRSVNAE
NYTDERFGLPTVTDILKELEKPGRDPRPEFKTAQFKEGVDKIEDLKPGMMLEGVVTNVTN
FGAFVDIGVHQDGLVHISHLSDKFVKDPREVVKAGDVVKVKVVEVDVPRRRIGLSMKKDA
AVTTPGSERNSSQDSSRKVEPRAKKPRQELPSKPKGVMAEALAKAMRKG
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcatcgcccgtatcgctgaagaactcggcgtcagagaaagacaggtccaagcc
gcagtggacctgctggacgaaggagccacggtaccgtttatcgcgcgctaccgcaaagaa
gcgacgggcggattggacgacacccagctcagaactctggaagttcggctggcttatctc
cgcgaactcgaggaccgccggcagaccattctggacagcatccgcgaacagggcaagctg
acgcctgaactggaacaagccattctcgccgccgataccaagaccctgctggaagacctt
taccttccgtacaaacccaaacggcgtaccaaggcccagatcgcacgcgaagcggggctc
gaaccgctagccgatgccctgctcggcgatccgtccctggtgcccgagagcgaagccgag
aaatacgtcgatgccgataaaggtgttcccgacgcggcagcggctcttgaaggagcacgg
caaatcctcatggaacgcttcgccgaacatgccgggcttttggccgatctgcgcgagagg
atttggaacgaaggcatactcgcctcgacggttgtcgaggggaaggaacaggccggcgcg
aagtttcgggattatttcgacttcgccgagcccatcgcgaaaattccttcccaccgcgcc
ttggccttgttccggggacgtaacgaggacgtgctggacctggtcttgaaagtcggcaag
gatgaagatgccgctcataaagccgcagaaagcctgatcgcgcggaccttcggcatcgcc
ggcaaaggacggcctgcggaccgctggctagccgacacggtgcattacgcctggaaagtc
aaaatcctgacccgcatcgacctcgacctcaagcaacgcttacgcgaagcggccgaagcc
gaggcaatccaagttttcgccaagaacctcaaggatttgctgctcgcggccccggccggt
ccccgtaccaccatgggccttgacccgggattgcgtaccggcgttaaagtcgcagtggtg
gaccagaccggcaagctgctggaaacggcaacgatttatccccaccagccgcaaaatcag
tgggatcaatcgatcgcgaccctggcccggatgatcgcccaatacgaagtggaactggtc
gcgataggcaacggtaccgcctcccgcgagaccgaccaattggtcggcgatctcatcaaa
cgccaccccgagctgcatatcaccaaagtcatggtgtcggaagcaggagcgtcggtttat
tccgcatccgagctggccgccaaggaattcccggatctcgacgtctcgttgcgcggcgcc
gtctcgatcgcccgccgcctgcaggatcctttggccgaactggtgaaaatcgaacccaag
gccatcggcgtcggccagtatcagcacgacgtgaaccagtcgcagctcgccaaaagcctc
gatgcggtggtcgaggactgcgtgaacgcagttggcgtcgatgtgaacacggcttctgtt
tctctgctccgttatgtctccggactgtcccagaccatcagccagaacatcgtcgagtac
cgaaaccggaacggggcgtttaatagccgcgaagaactcaagaaagtaccgcgcctcggc
gaaaaaactttcgaacaagcagccggatttctccgcatcatgaacggaaccaacccgctc
gacgcctcagccgttcatccggaagcctatccggtggtggaacgtatcatcagagatacc
ggcaaggacatccgcgaattgatcggcaacgcggccttcctccgcagcgtcaatgccgag
aattacaccgacgaacgtttcggccttccgaccgtcaccgacatcctgaaagaattggaa
aaacccggccgcgacccgcgcccggaattcaagaccgcacagttcaaggaaggtgtggac
aagatcgaggatctgaaacccggcatgatgctcgaaggcgtcgtcaccaacgttaccaat
ttcggcgctttcgtcgacatcggcgtgcatcaggatggcttggtccacatctcgcacctg
tccgacaaattcgtcaaggatccgcgcgaggtggtcaaggccggcgatgtagtgaaagtg
aaagtggtggaagttgacgtaccgagacgtcgcatcggcttgtcgatgaaaaaggatgcg
gcggtgaccacgcctggttcggagcggaattcttcgcaggactcgagtagaaaagtggaa
ccgagagccaagaaaccgcgacaggaactaccttcgaaaccgaagggcgttatggcagaa
gccttagccaaggcaatgaggaaaggctga
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