Methylocaldum szegediense: MSZNOR_4499
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Entry
MSZNOR_4499 CDS
T09668
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
msze
Methylocaldum szegediense
Brite
KEGG Orthology (KO) [BR:
msze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msze03016
]
MSZNOR_4499 (truD)
Enzymes [BR:
msze01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
MSZNOR_4499 (truD)
Transfer RNA biogenesis [BR:
msze03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MSZNOR_4499 (truD)
Prokaryotic type
MSZNOR_4499 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
CAI8953336
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All DBs
Position
MSZNORmain:complement(4355154..4356194)
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AA seq
346 aa
AA seq
DB search
MGDSNAALPYAFGGPAGTGAIKTSPEDFIVEEVLGFEPSDQGEHVFLRIEKRGENTDYVA
RQLARFAGVSARDIGYAGLKDRHGKTIQWFSVWLPGKPEPDWRQLESPSLRILQVRRNGR
KLRKGAAVANRFKITVRELKHDPAVLEQRLKQVAARGVPNYFGTQRFGREGHNVAKASAL
FAGTLGRADPHRRGIYLSAARSYLFNRILASRVAQNNWDQAISGDVFMFSDSRSFFKPET
ITPEITQRIEAREIHPSGVLWGKGTPAVSDQALAIEAAIVEEESELCRGLEAFGLEMARR
PLRLCPEGFNWELCDRSRLRLCFTLPSGAYATAVLRELIDIDHSDD
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgggcgattcgaacgccgccctgccctacgctttcggcggccccgccgggactggcgcg
atcaagacctcgccggaagatttcatcgtcgaggaagtgctgggtttcgaaccctcggac
caaggcgagcatgtttttctacgcatcgaaaagcgcggcgaaaacacggattatgtcgca
cgccagttggctcgttttgcgggcgtctcggcgcgggacatcggttacgccggtctcaaa
gaccgccacggcaaaaccattcaatggttcagtgtgtggctgccgggcaaacccgaaccg
gattggcgccaactcgagtcgccgtctctccgcatactccaagtccgccgcaatggccgc
aagcttagaaaaggcgccgcggtcgccaaccgcttcaagatcaccgttcgcgagttgaaa
cacgatcccgcagtgctggagcaacgcctgaagcaagtcgccgcccgaggcgttcccaat
tatttcggtacgcaacgttttggccgcgaaggacacaatgtcgccaaagcgtcagctctt
ttcgcgggaacgttagggcgcgcggacccgcatcgacgcggaatttatctatcagcggca
cgttcctatctgttcaaccgaatccttgccagccgggtcgcgcaaaacaactgggaccag
gccatcagcggcgatgtcttcatgttttcagactcgcgcagctttttcaaacccgaaacg
attaccccggaaattacccaacggatcgaggccagggagattcatccaagcggcgttctc
tggggcaaaggcacgcccgccgtcagcgaccaagcgttagcgatagaagcggctatcgtc
gaagaagagtccgaactctgccgcggactcgaagcgttcggactcgaaatggcccgccgg
ccgctgcggctttgcccggaaggctttaattgggaactttgcgaccgaagccgcttgcgt
ttgtgtttcacgctcccctccggggcttacgcgaccgcagttctgcgggaactgatcgat
atcgaccattcagacgactaa
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