Methylocaldum szegediense: MSZNOR_4504
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Entry
MSZNOR_4504 CDS
T09668
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
msze
Methylocaldum szegediense
Pathway
msze00541
Biosynthesis of various nucleotide sugars
msze01100
Metabolic pathways
msze01250
Biosynthesis of nucleotide sugars
Module
msze_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
msze00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
MSZNOR_4504 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
msze01005
]
MSZNOR_4504 (kdsA)
Enzymes [BR:
msze01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
MSZNOR_4504 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
msze01005
]
Lipid A
MSZNOR_4504 (kdsA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
CAI8953531
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All DBs
Position
MSZNORmain:complement(4359098..4359919)
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AA seq
273 aa
AA seq
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MQLCGFEVGLDRPFFLIAGTCVIESEQLAIETAGTLKEITSKLGIPFVYKSSFDKANRSS
HESFRGPGLEEGLRVLEKVRRDVGVPVLTDVHEDTPLREVAAIVDVLQTPAFLCRQTNFI
QNVCRQGKPVNIKKGQFMAPWDMKNVVDKARAVGNEQILVCERGVSFGYNNLVSDMRSLA
VMRETGCPVVFDATHSVQLPGGQGTASGGQREFIPILAKAAVAVGISGLFMETHPEPDKA
KSDGPNSWPLTRIKELLEVLVEIDRIVKQHGMI
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgtgcggattcgaagtcggcttggaccggccgttttttctgatcgccggcacc
tgcgtgatcgaaagtgaacaactcgccatagaaaccgcgggaacgctaaaggagatcaca
tccaagctcggcattccatttgtctataaatcctccttcgacaaggcgaaccgctcgtcg
cacgaaagcttccgtggcccaggtcttgaagagggtctgcgcgttctcgaaaaggttagg
agagatgtcggggtaccggtgctgaccgacgtccacgaggatacgccattgcgcgaagtc
gccgccatagtcgatgtgctgcagacgcccgcgtttctctgccgtcagaccaactttatt
cagaacgtctgcaggcaaggaaaaccggtcaatatcaagaagggccaattcatggcccct
tgggatatgaagaacgtagtcgacaaggcgagagccgtcggcaacgaacaaatcctcgtc
tgcgagcgcggtgtctcgttcggttacaacaatctggtttccgacatgcgctcgctcgcc
gtcatgcgcgagaccggttgtcccgtcgtgttcgacgccacccactcggtgcaattgccc
ggtggccagggcacggcttccggaggacagcgtgaattcatcccgatcttggccaaggcc
gctgtggcggtgggcatctctggcctgttcatggagacccaccccgaaccggacaaagca
aaaagcgacggacccaattcttggcctttgactcgcataaaggagctcttggaggtgctt
gtcgaaattgaccgcattgttaaacaacacggaatgatctaa
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