Methylocaldum szegediense: MSZNOR_4589
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Entry
MSZNOR_4589 CDS
T09668
Symbol
ispA
Name
(GenBank) geranyl diphosphate/farnesyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
msze
Methylocaldum szegediense
Pathway
msze00900
Terpenoid backbone biosynthesis
msze01100
Metabolic pathways
msze01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
msze00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
MSZNOR_4589 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
msze01006
]
MSZNOR_4589 (ispA)
Enzymes [BR:
msze01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
MSZNOR_4589 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
MSZNOR_4589 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
MSZNOR_4589 (ispA)
Prenyltransferases [BR:
msze01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
MSZNOR_4589 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
CAI8957599
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All DBs
Position
MSZNORmain:complement(4443177..4444079)
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AA seq
300 aa
AA seq
DB search
MNLETDLNRFMQICQARAEAALDLRLPAADRMPERLHQAMRYSVLGGGKRLRPLLTYAAG
QAVGVPWECLDGPACAVEFIHVYSLIHDDLPAMDNDDLRRGKPTCHIAFDEATAILAGDA
LQALAFHVLAHDSSIAVPASSRLAMVETLAKASGSLGMVGGQAIDLESVGKTLDLPSLEN
MHIRKTGALIRASVNLATLAHPSLDSSIADKLDHYAKCIGLAFQIQDDVLDEESDTQTLG
KTQGKDRDNNKPNYPALLGLAGAKQKARELHEEAVDTLSGLGAEADILRALSRFIIERRA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgaaaccgacttgaatcgttttatgcagatctgccaagcgcgggcagaggcg
gccctcgatctcagattgccggcagctgaccgcatgcccgaacgcctacatcaagccatg
cgctactcagtgttgggaggcggaaaaaggctgcgtccattgttgacctatgccgccggg
caagccgtcggcgttccatgggaatgtctcgacggccccgcctgcgcggtggaattcata
cacgtttattcgttgatacacgacgatttgccggcaatggacaacgacgacctacgccgc
ggcaagcctacctgccatattgcgttcgacgaagcaacagctattctcgccggcgacgca
ctgcaagccctggcctttcatgtcctcgcccatgactcgtcaattgccgtgcccgccagc
agtcggctcgcgatggtcgagaccttagcaaaggcgagcgggtccctgggcatggtcggg
ggtcaggcgatagacctcgaatcagttgggaaaacgctggatcttcctagtctggaaaac
atgcatatccgaaagacgggtgccctcattcgcgccagcgtcaacctggcgaccttggcc
catccgtcgctcgacagcagcatcgccgacaagctggaccattacgccaaatgcataggt
ctcgcgttccaaatccaggatgatgtactcgacgaggaaagcgatacccagaccttaggt
aagacccaaggcaaggatcgggacaataacaagccgaattatccggcgctcttagggctg
gcgggtgccaaacaaaaggcgcgagaacttcacgaagaggctgttgacacgctttccggc
ctcggtgccgaagcagacattctccgagcgctgtcgcggttcatcatcgaacggcgtgcc
tga
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