Methylocaldum szegediense: MSZNOR_4590
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Entry
MSZNOR_4590 CDS
T09668
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII subunit XseB
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
msze
Methylocaldum szegediense
Pathway
msze03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
MSZNOR_4590 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msze03400
]
MSZNOR_4590 (xseB)
Enzymes [BR:
msze01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
MSZNOR_4590 (xseB)
DNA repair and recombination proteins [BR:
msze03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
MSZNOR_4590 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Vps53_N
Motif
Other DBs
NCBI-ProteinID:
CAI8957648
LinkDB
All DBs
Position
MSZNORmain:complement(4444069..4444299)
Genome browser
AA seq
76 aa
AA seq
DB search
MAKKNPNFEESLAELEQLVERMEQGNLPLEESLKLFERGIQLTRFCQKALKEAEQKVQIL
LEENGEPTLKPFTDES
NT seq
231 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaagaacccgaattttgaagaatctctggccgaactggaacaactggtcgaa
cgtatggaacaaggcaatcttcctctggaggagtcgcttaaactgttcgaacgcgggatt
caattgacccgtttctgccaaaaagccttgaaagaagcagaacaaaaggtccagattttg
ctggaagaaaatggagaacccacgttaaagccttttaccgatgaatcttga
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