Methylocaldum szegediense: MSZNOR_4904
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Entry
MSZNOR_4904 CDS
T09668
Symbol
thrS
Name
(GenBank) threonine--tRNA ligase
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
msze
Methylocaldum szegediense
Pathway
msze00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
msze00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
MSZNOR_4904 (thrS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
msze01007
]
MSZNOR_4904 (thrS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msze03016
]
MSZNOR_4904 (thrS)
Enzymes [BR:
msze01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
MSZNOR_4904 (thrS)
Amino acid related enzymes [BR:
msze01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
MSZNOR_4904 (thrS)
Transfer RNA biogenesis [BR:
msze03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
MSZNOR_4904 (thrS)
Prokaryotic type
MSZNOR_4904 (thrS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
Motif
Other DBs
NCBI-ProteinID:
CAI8971898
LinkDB
All DBs
Position
MSZNORmain:4707454..4709370
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AA seq
638 aa
AA seq
DB search
MPVIRLPDGSARAFDHPVTLMEVAQSIGPGLAKAALAGRVDGKLVDLSYVVEGDASVEIV
TGKDEAGLEVIRHSTAHLLAQAVKALYPSAQVTIGPVVENGFYYDFAFERPFTPEDLKAI
EKKMAELAAKAIPIKRQVVPREDAIKFFRDQGEHYKAEIIEEIPPDEQISLYSQGDFTDL
CRGPHVPDTGKLRVFKLMKVAGAYWRGDARNAMLQRIYGTAWADQKDLDAYLHRVEEAEK
RDHRKIGKLLDLFHTQEEAPGMVFWHPNGWALYQQVEQYMRRVFRENGYQEIRCPQILDV
SLWKASGHWDNFHDNMFFTSSENREYAVKPMNCPGHIQVFKQHLHSYRELPIRYGEFGSC
HRNEPSGTLHGLMRVRGFSQDDGHIFCTEDQIEGEVVAFIDTLRRVYADFGFDDIQYKLS
TRPPKRLGDDSIWDKAEGALAAALAAQGIDYELQPGEGAFYGPKIEFALKDAIGRVWQCG
TIQVDFMMPGRLGAEYVGEDNARHTPVMLHRAIVGSMERFIGILIEHYAGYFPLWLAPVQ
AVVLNITGNQAEYAAELAAELVKQGFRVKTDLRNEKIGFKIREHSLQRVPYLLIVGDKEL
NSRTVSVRTQKGQDLGGFSLPDLIRKFADEVASRAAFH
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtgatacgtctcccagatggttccgctcgtgcattcgatcaccccgtaacgcta
atggaggtggcgcaatctattggtccggggctggcgaaagcggcgttggccggacgggtc
gacggcaaactggtcgatttgtcgtatgttgtcgaaggcgatgcttcggtggagatcgta
accggcaaggatgaggctgggttggaggtcattcgtcattcgactgcgcatctgctcgct
caggccgtcaaggctttgtatccgagcgcgcaggtgacgatcggtccggtagtggaaaac
gggttttattatgatttcgccttcgaacgccctttcacgccggaagatctgaaggcgatc
gagaaaaagatggcagaattagcggcaaaggccattccaatcaagcggcaggtggtgcct
cgagaggatgcgatcaaatttttccgcgaccagggcgagcactataaggcggaaatcatc
gaggaaataccaccggacgagcaaatctccctttattcacagggtgattttaccgatctt
tgtcgcggccctcacgtacccgataccggaaagctcagggtgttcaagctcatgaaagtt
gcgggcgcgtattggcggggggatgcgcgcaatgccatgctccagcgaatctacggaacc
gcctgggccgatcaaaaggatttggacgcctatttgcaccgtgtggaagaggcggaaaag
cgcgaccatcgcaaaatcggcaagcttctggacctgttccacactcaggaagaggctcca
ggcatggtgttctggcaccccaacggctgggcgctctatcagcaggtcgagcaatatatg
cgccgggtgtttcgcgagaacgggtatcaggaaatccgctgtcctcagattctggacgtc
agcctttggaaggcatcgggccattgggataattttcacgacaatatgttcttcacctcc
tctgagaatagagagtacgcggtgaagccgatgaactgcccgggccacatccaggtcttc
aagcagcatctacatagttatcgcgaattgccgattcggtacggagagttcggttcctgt
caccgcaatgaaccttccggcaccttgcacgggcttatgcgtgtgcgcggtttcagtcag
gacgatggtcacatcttttgtaccgaggatcaaatcgaaggcgaagtcgttgcgttcata
gacaccttgcggagggtgtatgccgatttcgggtttgacgatattcagtacaagctgtct
acgcgtccgcccaaacggctcggcgacgacagtatttgggacaaggctgaaggggcgttg
gcggcggctctggcggcgcaaggcatcgactacgaattgcaaccgggggagggggctttt
tacggtcccaagatcgaattcgcgctgaaagatgcaatcggtcgggtgtggcagtgcggt
accattcaggtggacttcatgatgccgggacgtttgggtgccgaatacgtgggcgaggac
aatgcccgtcatacgccggttatgttgcacagggcgatcgtgggttcgatggagcgcttc
atcggtattctcatcgagcattatgcagggtatttcccgctttggctggcgccggtgcag
gcggtggtgctcaatattacgggaaatcaggccgagtatgcggctgaactggccgcggag
cttgtaaaacaaggcttccgggtaaagaccgacttgagaaacgagaagataggctttaaa
attcgcgaacatagcttgcagcgcgtgccctatttgttgatcgtcggcgacaaagagctg
aattcccgcaccgtttctgtccgcacacaaaaaggccaggatctgggtgggtttagcttg
ccggatttgattcgaaagtttgctgacgaagtggctagtcgtgctgcttttcactaa
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