Methylocaldum szegediense: MSZNOR_4964
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Entry
MSZNOR_4964 CDS
T09668
Name
(GenBank) MutS-like protein
KO
K03555
DNA mismatch repair protein MutS
Organism
msze
Methylocaldum szegediense
Pathway
msze03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
MSZNOR_4964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msze03400
]
MSZNOR_4964
DNA repair and recombination proteins [BR:
msze03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
MSZNOR_4964
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
AAA_14
AAA_22
DnaB_C
DUF7990
Motif
Other DBs
NCBI-ProteinID:
CAI8974399
UniProt:
A0ABN8XCN4
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Position
MSZNORmain:4765769..4767367
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AA seq
532 aa
AA seq
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MNALYKTLLQSDAKEPPAVRFATPGATGEGVIDVSTFQAIEVDRLFDAINHAATLTGQAT
LYRSLVQPLASANLVRAKQDAVREIESNKALRESLETLTKQAKSLEDDFYGLLFGTFLGL
LSSPAHKLEIEGYGYETYKKGTRFMLNLVDAANRVPKPNSEYLRALIDDLRNFANSRAYA
LMKGPVYRTEKDVRPKAEKPWYMPAIRFRPSLFKPVGLTIAAVLLLLALQFVPLLLDMAM
SIAPVFWLFLLPISFVYIPLVGGFDRDGCIYPLRDIFKRSEDVQNTLDSLGKLDELLSFV
RFKEAFGHPVVLPKIIEAERHSMTFKNVRNPVLGKDNPGYVPNDIGLKNTRLTFITGPNS
GGKTAFCKTLAQSQLLAQIGCYVPAQEAELTVADRIFYQVPEISHLADGEGRFGTELKRT
KNIFLATTSKSLVIMDELSEGTTHEEKIEISMNILDGFYQKGGNTVLITHNHELVDAFQK
KGIGLAKQVEFKNEQPTYRVVEGISRVSHADRVARKIGFSKEDIARYLSGGK
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccctatacaagacacttcttcaatccgatgccaaggagccgccggccgtccgt
ttcgccacccctggcgcgaccggcgagggcgtcatcgacgtttcgacgtttcaggctatc
gaagtcgataggctgttcgatgccatcaaccatgccgctacgctcaccggtcaggcgact
ctttatcgctcgctggtgcagcctttggcgtcggcgaacctcgttcgggccaagcaagat
gcggttcgcgagatcgaatccaataaagcgcttcgagaatcgctggagaccctgaccaag
caggccaagtcgctggaagatgacttttacggattgttgttcggcacgttcttgggcctt
ctgagctctcctgcgcacaagctggagatcgaaggctacggttatgagacctataagaaa
ggtactcggttcatgctcaatttggtggacgcggccaaccgcgtgccgaagccgaacagc
gaatatttgcgcgcattgatcgacgacttgcgaaatttcgccaactcgcgcgcctatgcg
ctgatgaaggggccggtataccgaaccgaaaaagacgttcgacctaaggcggagaagccg
tggtatatgccggcgatccgctttcgaccttcgctgttcaaaccggtcggcttgaccatc
gcggctgtgctcctgcttcttgccctccagttcgtgccattgctgctcgatatggcgatg
tcgattgcgccggtattctggttgttcctgctgcccatcagtttcgtttatatccccttg
gtcggcggattcgaccgcgacggctgcatctacccgttgcgcgacatcttcaagcgctcc
gaagacgtgcaaaacacgttggactccttgggcaagctggacgagcttctgagcttcgtc
cgcttcaaggaagctttcggccatcccgttgtcctgcctaagatcatcgaagccgagcgc
cattccatgacgttcaagaacgtgcgcaatccggtgctcggcaaggataatccgggctat
gtgcccaacgatatcggcctcaaaaacacgcggctcaccttcattacgggcccgaacagc
ggcggcaagacggcgttctgcaagaccttggcgcagagccagttgctcgcgcaaatcggc
tgctacgtgcccgctcaggaagcggaattgaccgtcgcggaccgcattttttaccaggtc
cccgaaatcagccatctcgccgatggagaagggcgcttcggcaccgaactcaagcgcacc
aagaatatttttctcgcgaccacatcgaaaagtctggtgatcatggacgaactctcggaa
ggcacgacccacgaggaaaagatcgagatttccatgaatatcctggacgggttctatcag
aaaggcggcaacacggtcttgatcacccacaaccacgaactggtcgacgcttttcagaaa
aaaggcatcggcctcgcaaagcaggtcgaattcaagaacgagcagccgacctaccgagtg
gtggaaggcatttccagagtcagtcatgcggaccgggtggctcggaaaatcggcttttca
aaagaagatattgcccggtatttgtccggtggcaaatga
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