Methylocaldum szegediense: MSZNOR_5019
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Entry
MSZNOR_5019 CDS
T09668
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
msze
Methylocaldum szegediense
Pathway
msze03030
DNA replication
msze03430
Mismatch repair
msze03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSZNOR_5019
03430 Mismatch repair
MSZNOR_5019
03440 Homologous recombination
MSZNOR_5019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msze03032
]
MSZNOR_5019
03400 DNA repair and recombination proteins [BR:
msze03400
]
MSZNOR_5019
Enzymes [BR:
msze01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSZNOR_5019
DNA replication proteins [BR:
msze03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MSZNOR_5019
DNA repair and recombination proteins [BR:
msze03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MSZNOR_5019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_18
AAA_5
AAA_16
AAA_30
AAA_14
ResIII
AAA_assoc_2
AAA_2
nSTAND3
Mg_chelatase
AAA_19
TsaE
APS_kinase
PIF1
AAA_7
AAA_28
SKI
Rad17
CbiA
NTPase_1
AAA_29
Thymidylate_kin
Herpes_Helicase
SRP54
Motif
Other DBs
NCBI-ProteinID:
CAI8976726
LinkDB
All DBs
Position
MSZNORmain:complement(4829958..4831592)
Genome browser
AA seq
544 aa
AA seq
DB search
MPYQALARKWRPRTFSEIVGQEHVVRALIHAIEFDRMHHAYLFTGTRGVGKTTIARILAK
ALNCEGRKTSDPCGECVICREVDEGRFVDLIEVDAASRTKVEDTRDLLENVQYAPSQGRY
KVYLIDEVHMLSGHSFNALLKTLEEPPPHIKFLLATTDPQKIPVTVLSRCLQFSLKRLTP
DQIRSQMEEILRRENIEYEVNAVKLLARAAEGSMRDGLSLLDQAIVHGGGRLRETDVSLM
LGTVARHPVFELLSALAEGDAAALLRQIDQMAEHTPNFADVLQQILIVLHHASLAQWVPE
AIRREDDADRILDLARRISAEDLQLFYQIGLIGQRDLPLAPDPRSGFEMVMLRMLAFRPA
TSSADMQSGVDATPPKTNESPKTTRKVDVRPTPAPVQTDPVPVKNETKTDTGGVPQTGAP
HDWHELIRAMGITGLTRELANNCVLLDLDEKRCILALDPQHAHLRVSRVEANLEKALRDY
FRSPLKLTIKIEAPGQETPAKLIQREKEERQRNAEIEIEQDENVRALKERFDARIVPGST
KPID
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgccgtatcaggctctagcccggaaatggcgccctcgcacttttagcgaaatcgtcggc
caggagcatgtcgttcgagcgttgatccatgcgattgagttcgaccgcatgcatcatgcc
tatctcttcaccggtacccgtggcgtgggcaagaccactattgctcgaattctcgccaag
gcgctcaattgcgagggtcgaaaaacatccgatccgtgcggcgaatgcgtgatctgccga
gaagtggacgaaggccgctttgtcgatttgatcgaagtggacgccgcctcgcgtaccaag
gtcgaagatacccgcgatctgctcgagaacgttcaatacgcgccgagccaggggcgatac
aaggtttacttgatcgacgaagtgcacatgctgtcggggcacagcttcaacgctctgctc
aagacgctcgaagagccgcctccccacatcaaattcctgttggccacgaccgatccgcaa
aaaattccggtcacggtgctgtccagatgccttcaatttagtttgaagcggctgactccg
gaccagattcgaagccaaatggaagagattctgaggcgtgagaacatcgagtacgaagtc
aacgccgtaaagctgctcgcccgggcagcggaaggctccatgcgtgacggactgagcctt
cttgatcaggcgatcgtccacggcggcggtcgccttcgggaaaccgacgtcagcctcatg
ctaggtaccgtcgcgaggcatccggttttcgagctcctgtcggcgctcgccgagggagac
gcggcggcgctgcttcggcagatcgatcagatggcggaacacacgccgaacttcgccgac
gtgctgcagcaaatcctgatcgtcctgcatcacgcctcgctagcccagtgggtacccgag
gcgatcaggcgcgaggatgacgccgatcggattctcgatctagcccgccggatcagcgca
gaggatttacagcttttttatcagatcggcttgatcggtcagcgggatttgccactcgcc
cctgacccgcgctcgggctttgaaatggtgatgctgcgcatgctggcatttcgtccggcg
acatcatcggcggacatgcagagcggcgtcgatgcgacgccccctaagacaaacgaatcg
ccgaaaacaacccgaaaggtcgatgttcgtcccacgcctgcgccggttcagaccgaccct
gtgccggtcaagaacgagaccaagaccgacaccgggggagtacctcagaccggagcgccc
catgattggcacgaactgatccgggcgatgggcatcaccggcttgactcgcgaactggcg
aacaattgcgtattgctggacctggatgaaaaacgctgcattcttgcgctcgacccgcaa
catgctcatctccgcgtcagccgggtggaagccaacttggaaaaggcactgagggattat
ttccgaagccctctgaaattgacgatcaagatcgaggcgcccggacaggaaacacccgct
aagctcattcagcgcgaaaaagaggaacgccaacggaacgcggaaatcgaaatagagcaa
gacgagaacgtcagagcactgaaagagcgtttcgacgcacgtatcgtccctggttccacc
aaacccatagactaa
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