Mesoplasma tabanidae: MTABA_v1c02200
Help
Entry
MTABA_v1c02200 CDS
T05273
Symbol
rnr
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
mtab
Mesoplasma tabanidae
Pathway
mtab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mtab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MTABA_v1c02200 (rnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtab03019
]
MTABA_v1c02200 (rnr)
03016 Transfer RNA biogenesis [BR:
mtab03016
]
MTABA_v1c02200 (rnr)
Enzymes [BR:
mtab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
MTABA_v1c02200 (rnr)
Messenger RNA biogenesis [BR:
mtab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MTABA_v1c02200 (rnr)
Transfer RNA biogenesis [BR:
mtab03016
]
Prokaryotic type
tRNA degradation factors
MTABA_v1c02200 (rnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
S1
OB_RNB
CSD2
OB_RNR_1st
S1CSD-TOTE-2
S1_RRP5
RNase_II_C_S1
Pox_RNA_pol
Motif
Other DBs
NCBI-ProteinID:
ATZ21423
UniProt:
A0A2K8P6Q7
LinkDB
All DBs
Position
239437..241551
Genome browser
AA seq
704 aa
AA seq
DB search
MNKEIILQKIKENNETISISSLASKLNNFDFAKLENILNQLNEENAIAFTTEKNIYLLGG
NFKKGNLRMNPKGFGFVNDILEPEEEAYFVAPVSLNGCFDSDEVIFKVVKEQDKTRAEII
ELCLRVKEFLIGEIVRSYDGKFLDFVPSDQAFTGFRFRILNKKEFPIEEYQIIKAKIISV
KERLMFVRLKKVIGDARKASDRILSIAEEFEIRTEFDKATLKEAERVNIPVDKEIEEINR
RMNNSLLDKMVVTIDGIDSKDLDDAICVEKMDNGEFKLYVAIADVSHYVEQKTPLDKEAL
IRGNSTYLANRVLPMLPKILSDDLCSLNPNTKKFALACEMSFDKTGKMTSKKVYETIMIS
KVRLNYNEVNEYIINKTWNHCNESKKMIDEAIELFKLIEQVKIKRGTITFDVREPKVIMD
ENSNVIEIKARQTGESEKLIEQFMVSANEAVAEIVNDMELPFIYRNHDKPDEEDLITWYQ
SLKSFGIDPKLTPAEMLDPLNINKTLKRISEQTKDPIEEELLNLSLLRYMAKAKYELENI
GHFGLSSSCYTHFTSPIRRYSDLIVHRYLKQYVINKNYDQKALEINQAFIKKASVIINET
ETTSVDCEREVVKACTVEYMSDKIGNTYEGTISVALKFGIFVQLDNMVEGLVHISNLEPN
IVYDETNKILIKHDNTFYRMGQKVKIKVISADIRKRKIDFILVK
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagaaataatattacagaaaataaaagaaaataatgaaactatatcaataagc
agtttagcatcaaagttaaataattttgatttcgctaaattagaaaatattttaaaccag
ttaaatgaagaaaatgctattgcatttactactgaaaaaaacatttacttattaggggga
aattttaaaaaaggaaatttaagaatgaatccaaagggttttggatttgttaatgatatt
ttagaacctgaagaagaagcttattttgttgcaccagtcagtttaaatggttgttttgat
agtgatgaagtaatttttaaagttgttaaagaacaggataaaacaagagcagaaataatt
gaactttgtttaagagttaaagaatttttaattggtgaaattgttaggagttatgatgga
aaatttttagactttgtccctagtgatcaagcttttacaggatttagatttagaattttg
aacaaaaaagagtttccaattgaagaatatcaaataattaaagcaaaaataatttcagtt
aaagaaagattaatgtttgtaagattaaaaaaggttattggtgatgctagaaaagctagc
gacagaattttatcaattgcagaagaatttgaaataagaactgaatttgataaagcaacc
ttaaaagaagcagaaagagtaaatattcccgttgataaagaaattgaagaaattaataga
agaatgaacaattcattgctagataaaatggttgttacaattgatggtattgattcaaaa
gacttggatgatgctatttgtgttgaaaaaatggataatggtgagtttaaactttatgtt
gcaattgcagatgtaagtcattatgtagaacaaaagactccattagataaagaagctcta
ataagaggaaactctacgtatttagcaaatagagttttacctatgttgcctaaaatatta
agtgatgatttgtgctcacttaatccaaatactaaaaaatttgctttagcttgtgaaatg
agttttgataaaacaggtaaaatgactagtaaaaaagtttatgaaacaattatgatttca
aaagttagattaaactacaatgaagttaatgaatacattataaataagacttgaaatcac
tgtaatgaatctaaaaaaatgatagatgaagcaattgaactttttaaattaattgaacaa
gttaaaattaaacgtggaactattacatttgatgtgcgtgaaccaaaagttataatggat
gaaaatagtaatgttattgaaattaaagcaagacaaacaggtgaatcagagaagctaatt
gaacaattcatggttagtgctaatgaagctgtagctgaaatagttaatgacatggaatta
ccatttatttatagaaatcatgataaacctgatgaagaagatttaattacatgatatcaa
tcattgaaatcatttgggatagatcctaaattaactccagcagaaatgttagatccttta
aacattaataaaacattaaagcgtattagtgaacaaacaaaagacccaattgaagaagaa
ctattaaatttatcacttctgagatatatggcaaaagcaaagtatgaattagaaaatatt
ggacactttggattatcaagttcatgttatactcactttacttcaccaattagaagatac
agtgacttaattgttcatagatacttaaaacaatatgttattaataaaaattacgatcaa
aaagcattagaaataaatcaagcatttattaaaaaagcatcagttattattaatgaaact
gaaacaacaagtgtagactgtgaacgtgaagttgtcaaagcttgtacagttgagtatatg
agtgataaaattggtaatacttatgaaggaacaatatcagttgctttaaaatttggtatt
tttgtacaactagataatatggttgagggtttagttcatatttcaaatttagaaccaaac
atagtgtatgatgaaactaataaaattttaatcaagcatgataatacattttacagaatg
gggcaaaaagttaaaattaaagttatcagtgctgatattagaaaaagaaaaattgacttt
attttagttaagtaa
DBGET
integrated database retrieval system
