Mesoplasma tabanidae: MTABA_v1c06460
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Entry
MTABA_v1c06460 CDS
T05273
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mtab
Mesoplasma tabanidae
Pathway
mtab03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mtab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MTABA_v1c06460 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtab03021
]
MTABA_v1c06460 (rpoC)
03400 DNA repair and recombination proteins [BR:
mtab03400
]
MTABA_v1c06460 (rpoC)
Enzymes [BR:
mtab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MTABA_v1c06460 (rpoC)
Transcription machinery [BR:
mtab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MTABA_v1c06460 (rpoC)
DNA repair and recombination proteins [BR:
mtab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MTABA_v1c06460 (rpoC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
ATZ21838
UniProt:
A0A2K8P5V4
LinkDB
All DBs
Position
complement(740684..744448)
Genome browser
AA seq
1254 aa
AA seq
DB search
MENKNNKVIKIELASADTIRSWSHGEVTKPETINYKTLKAEKDGLFDEKIFGPTKNYECF
CGKFKKANPMNKGKKCEKCGVELTESIVRRERMGHIELAEPVTHIWMVKVSPSRIASLLD
LKSKELEEVVYFVSHIVLDPGTSKHFAAKEVLDLGVSKSQKTRSKLRPAIEEIVTLINDP
AHRDTLKAERLLEELNNPTIPFSIDEATALISKYTDAKFGIGASAIEELLKQIDLDKEIE
ITKNTLDAIGQNADNSKLLKRLDILESLKRSNQKPEWMVLRVLPVIPPDIRPIIQLDGGR
FTTSEINDLYRRIIIRNERLLKVKEMGAPSIIINNEKRMLQEAVDALLDNERKPRPIQGK
DKRPLKSLTSVLKGKQGRFRQNLLGKRVDYSGRSVIAIGPDLKMYQAGIPREMALTLFKP
FVIQWLQEHEYAENVKVAEKMILQNDAKIWEALEHVIKDRPVLLNRAPTLHRLGIQAFEP
KLVKGKAIRLHPLVTTAFNADFDGDQMAVHVPITKEAVAEARALMLGSNAILGPKDGKAI
VTPGQDIILGNYYATFEEKGQKGEGTIFAEITEAINAFDTGMVSLNAIIGIAVDALPTEK
FTEEQRKGYLVTTVGKILFNQIFDASFPWINSSSIYDAKEAVKTFIFDFSKDINEVIAEY
SVISPIKKKELSIIIEIYFNNFGARKTAEMLDKMKDLGFKYSTKSGTTISAGDVVAFKHK
YEEFAEADQKVAEITNFYNEGMLTKEEKKHRVIEVWSDVKDDIQKRLELVLKQDTKNPVF
VMADSGARGNVSNFTQLVGMRGLMNDTKGDIKEIPIKSSFREGLSVSEYFVSTHGARKGM
ADLALKTADSGYLTRRLVDVSQEIVVVNEDCKANKGFEIESVIDTKHNNIIVPLKDRIVG
RYSFNDIKDIKGNVVVAKDTLIESKEADAIIAAGITKVTIRSVLTCDNQKGVCQRCYGRN
LATASLVKIGEPVGVIAAQSIGEPGTQLTMRTFHTGGVAGDADITQGLPRIKELLDVTTQ
KGSVAIIAEKAGVVTDIINKNGINTIVVTEEVNGTQIEKQYKTMYNAVLRVNKGDEVKPG
KKLTEGSINLHDLLEVAGTTAVQNYILKEVQKVYRLQGIEISDKYIEIIVKQMLNKVKVI
QSGESHLLQGEIVTQQKFKEVVTQCIRDGKVPPVAKNQILGIKKAPLKSESWLSSASFQD
TARVLTDAIIKGREDKLDGLKENIMLGNLIPAGTGLTGIDEVMEIAEEYHKNEY
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataaaaacaataaagtaattaaaattgaattagctagtgctgatactattcgc
tcatgatcgcatggagaagtaactaagcctgaaacaattaactataaaacattaaaagct
gaaaaagatggtttgtttgatgaaaaaatatttggaccaactaaaaactatgaatgtttt
tgtggaaaatttaaaaaagccaaccctatgaataaagggaaaaaatgtgaaaaatgtggt
gttgagttaactgaatcaatcgtgcgtcgtgaaagaatggggcacattgaattagctgaa
cctgttactcatatttgaatggttaaagtatcaccatcaagaattgcgtcattattggac
ttaaaatctaaagaattagaagaagttgtttactttgtttcacatatcgttttagatcca
ggaacatcaaaacactttgcagctaaagaggttttagatttaggagtttcaaagtcacaa
aaaactcgtagcaaattaagacctgctattgaagaaattgttacgttaataaatgatcca
gctcatagagatacactgaaagctgaaagattattagaagaattaaataatccaactatt
cctttttcaattgatgaagctactgctttaatttcaaaatatacagatgctaaatttggt
attggtgcttctgctattgaagaattattaaagcaaattgatttagataaagaaattgaa
atcacaaaaaatactttagatgctattggtcaaaatgctgataactcaaaattattaaaa
agattagatatcttagaatcattaaaacgttctaatcaaaaacctgaatgaatggtatta
cgtgttttacccgttattccaccagacattcgtcctatcattcaattagatggaggaaga
tttacaacttctgaaattaatgatttataccgtcgtattattattagaaatgaacgttta
ttaaaagttaaagaaatgggtgcaccatcaattattattaacaacgaaaaacgtatgtta
caagaagctgttgatgcattattagataatgaacgtaagccacgtccaattcaaggaaaa
gacaaacgccctttaaaatcattaacaagtgtacttaaaggaaaacaaggtcgtttccgt
caaaacttacttggaaaacgtgttgactactcaggtcgttcagttattgctattgggcca
gatttaaaaatgtatcaagcaggaattcctcgtgaaatggctttaacattatttaaacct
tttgtaattcaatgattacaagaacatgagtatgctgaaaacgttaaagttgctgaaaaa
atgattttacaaaatgatgctaaaatttgagaagcattagaacacgtaattaaagataga
ccagttctattaaaccgtgctcctactcttcacagacttggtattcaagcatttgaacct
aaattagttaaagggaaagcaattcgtcttcacccgcttgtaactactgcgttcaatgcc
gactttgatggggaccaaatggctgttcacgttccaattacaaaagaagcagttgctgaa
gctagagctttaatgttaggatcaaatgctattttaggacctaaagacggaaaagcaatt
gtaactccaggtcaagatattattttaggtaattactatgctacttttgaagaaaaaggg
caaaaaggtgaaggaacaatctttgctgaaattacagaagctattaatgcttttgataca
ggaatggtttcattaaacgcaattattggaattgcagttgatgcattacctactgaaaaa
tttactgaagaacaaagaaaaggttatttagtaacaacagttggtaaaatactattcaac
caaatatttgatgcttcattcccatgaattaactcatcaagtatttatgatgcaaaagaa
gcagttaaaacatttatttttgacttctcaaaagatataaatgaagttattgctgagtac
tcagttataagtccaattaagaaaaaagaattatcaattattattgaaatatactttaac
aattttggagcaagaaaaacagctgaaatgctagataaaatgaaagatttaggatttaaa
tattctacaaaatctggaactactatttcagctggagacgttgttgcctttaaacataaa
tatgaagaatttgctgaagctgatcaaaaggttgcagaaattacaaacttctataatgaa
ggtatgttaactaaagaagagaaaaaacaccgtgttattgaagtttgatctgatgttaaa
gatgacattcaaaaaagacttgaattagtattgaaacaagatactaaaaaccctgttttc
gtgatggcggactctggagcccgtggtaacgtttctaactttacacaacttgtaggtatg
cgtggacttatgaacgatactaaaggggacattaaagaaattccaattaaatcatcattc
cgtgaaggtttatcagtttcagaatacttcgtttcaactcacggtgcccgtaaagggatg
gctgatttagccttaaaaactgccgattcaggttacttaacacgtcgtttagttgacgtt
tcacaagaaattgttgtagttaatgaagactgtaaagcaaataaaggatttgaaattgaa
tcagttattgatacaaaacacaacaacattattgttccattaaaagacagaattgttggg
cgttactcatttaatgatattaaagacatcaaaggtaatgttgtagttgctaaagatact
ttaattgaatcaaaagaagctgatgcaattattgctgctggaattacaaaagtaacaatt
cgttcagtattaacttgtgataaccaaaaaggagtttgtcaaagatgttacggacgtaac
ttggcaactgcatcattagttaaaattggtgaacctgttggagttattgctgctcaatca
attggtgaacctggaactcaacttactatgcgtaccttccataccggaggggttgcaggg
gacgctgatattactcagggtcttcctcgtattaaagagttacttgacgttacaactcaa
aaaggttcagttgctattattgctgaaaaagctggagttgttacagatatcattaacaaa
aatggaattaatacaattgttgttactgaagaagttaatggaacacaaattgaaaaacaa
tacaaaacaatgtataacgctgtattaagagttaataaaggtgatgaagttaaaccaggt
aaaaaacttactgaaggttcaattaacctacatgatctattagaagttgctggaactaca
gctgtacaaaactacatcttaaaagaagttcaaaaagtttaccgtttacaagggattgaa
atttcagataaatatattgaaattatcgtaaaacaaatgttaaacaaagttaaagttatc
caaagtggtgaatctcatttgctgcaaggtgaaattgtaactcaacaaaaatttaaagaa
gtagttactcaatgtatccgtgatggtaaagtacctccagttgctaaaaatcaaatttta
ggtattaaaaaagctccattgaaatctgaatcttgattatcatcagcttcattccaagat
actgcgcgtgtattaacagacgcaattatcaaaggtagagaagataaattagatggtcta
aaagaaaacatcatgttaggaaacttaattcctgcaggaacaggtttaactggaattgat
gaagtaatggaaattgctgaagaataccacaaaaacgaatactaa
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