Methylobacterium tardum: M6G65_13785
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Entry
M6G65_13785 CDS
T08338
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mtad
Methylobacterium tardum
Brite
KEGG Orthology (KO) [BR:
mtad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mtad03016
]
M6G65_13785 (rnd)
Enzymes [BR:
mtad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
M6G65_13785 (rnd)
Transfer RNA biogenesis [BR:
mtad03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
M6G65_13785 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
URD39376
LinkDB
All DBs
Position
complement(2897733..2898905)
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AA seq
390 aa
AA seq
DB search
MDLITTTDTLREICTQLAEQPFVTVDTEFMRETTYYPKLCLIQMAAPDGSAVLIDPLAPG
LDLQPFIDLMADERVVKVFHSARQDLEIIWLIGGLLPHPFFDTQVAAMVCGYGDSVSYEQ
LVNDVAKAKIDKSSRFTDWSRRPLSDAQLTYALSDVTHLVKVYEVLVAELLRTDRGAWLD
EEMAVLTSPETYRADPAQAWRRLAGRMRKPREIAVLMEVAAWRESEAQARNVPRGRILKD
EAVIDVASAAPRSAEALARLRTIPAGFERSRTGADIVAAVERGLSRDTSDIRLPERVRRS
GGNGAIVELLKVLLKAVCEAEGVAPKIIGTVGDLEAIADDDAADVPALQGWRRSLFGDRA
LALKQGRLALSVEAGRIVVRALEPSAHSDV
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggacctgatcaccacgaccgacacgctgcgcgaaatctgcacccagctggccgagcag
cccttcgtaaccgtcgacacggagttcatgcgtgagacgacgtactacccgaagctctgc
ctgatccagatggcggctccggacggctccgcagttctgatcgacccgctggcacccggg
ctcgatctgcagccgttcattgacctcatggccgacgagcgcgtcgtgaaggttttccat
tccgcgcgccaggatctcgagatcatctggctgatcggcggacttctgccgcacccattc
ttcgacacgcaggtcgccgcgatggtgtgcggctacggcgactcggtttcctacgagcag
ctcgtcaacgacgtggccaaggccaagatcgacaagtcctcccgcttcacggactggtca
cggcggccgctctccgacgcgcagctcacgtatgcgctgtcggacgtcacccatctggtg
aaggtctacgaggttctcgtcgccgagctgctgcgcacggatcgcggtgcttggctcgac
gaggaaatggccgtgctgacctcgcccgagacctaccgggccgatccggcgcaagcctgg
cgccgcttggccggccggatgcgcaagcctcgcgagatcgccgtgctgatggaagtcgcc
gcttggcgcgagagcgaggcccaggcgcgcaatgtcccgcgcgggcgaatcctgaaagat
gaggccgtgatcgacgtggcttcggcggcgcctcggagcgcggaggccctggcccggctg
cgaacgatcccggcgggcttcgagcgctcgcgcacgggggccgacatcgtcgcggccgtc
gagcgcgggctgtcgcgcgacaccagtgacatccgtcttccggagcgcgtgcgccggagc
ggcggcaacggcgcgatcgtggagcttctcaaggtcctcctgaaggcggtgtgcgaggct
gagggcgtcgcgcccaagatcatcggcacggtcggcgatctggaagcgattgccgacgac
gatgctgccgacgttccggcccttcagggctggcggcggagcctgttcggggacagggcc
ttggccttgaaacaggggcggctggcgctgtccgtggaggcgggccgtatcgtcgttcgt
gcccttgagccctcggcacacagcgacgtctga
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