Methylobacterium tardum: M6G65_30780
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Entry
M6G65_30780 CDS
T08338
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
mtad
Methylobacterium tardum
Pathway
mtad00300
Lysine biosynthesis
mtad00470
D-Amino acid metabolism
mtad01100
Metabolic pathways
mtad01110
Biosynthesis of secondary metabolites
mtad01120
Microbial metabolism in diverse environments
mtad01230
Biosynthesis of amino acids
Module
mtad_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mtad00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
M6G65_30780 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
M6G65_30780 (dapF)
Enzymes [BR:
mtad01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
M6G65_30780 (dapF)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
DUF6140
Motif
Other DBs
NCBI-ProteinID:
URD36663
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All DBs
Position
6425013..6425900
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AA seq
295 aa
AA seq
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MSALAHRRFLKMHGAGNAIVVLDLRGSSVTVRPEEARAIAQDPGSSFDQLMVLHDPVSRG
TDAFMRIYNTDGSESGACGNGTRCVAYAMLDDPAMARPAEGGRLTLETAAGLLGVRRVSE
RAFTVDMGRPRLAWDEIPLSEPFPDTRRIELQIGPIDDPILHSPGAVNMGNPHAVFFVEQ
DPDSFDLARIGPMLENHPLFPERANISVAQVTGRETIKLRVWERGAGLTLACGTAACATV
VAASRLRMIGRQAHVALPGGELFVEWRADDHVLMTGPVALVAEGTLAPELFDSAA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcactcgcccacagacgcttcctgaagatgcacggcgccggcaacgcgatcgtg
gtgctggacctgcgcgggtcctcggtgacggtgcggcccgaggaagcgcgggcgatcgcg
caggatccggggtcgagcttcgaccagctgatggtgctgcacgatcccgtgagccggggc
accgatgcgttcatgcggatctacaacaccgacggctcggaatcgggcgcttgcggcaac
ggcacgcgctgtgtcgcctacgcgatgctcgacgacccggccatggcccggcccgccgag
ggcggtcggctgacccttgagacggcggccggtcttctcggcgtgcgccgcgtctccgag
cgcgccttcacggttgatatgggtcggccgcggctcgcctgggacgagatccccctgtcc
gagccgttccccgacacccgccggatcgagctgcagatcggcccgatcgacgatccgatc
ctgcattcgccgggtgccgtgaacatgggcaacccgcacgctgtgttcttcgtggagcag
gatccggacagcttcgacctcgcccggatcggcccgatgctggagaaccacccgctgttt
ccggagcgcgccaacatctcggtggcgcaggtcacgggccgcgagacgatcaagctccgc
gtctgggagcggggggccgggctgacgctcgcctgcggcacggccgcctgcgccaccgtc
gtggccgcctcgcggctccgcatgatcggccggcaggcgcatgtcgcgctgccgggcggc
gaattgttcgtcgaatggcgcgccgacgaccacgtcctgatgaccggcccggtcgcgctc
gtcgccgagggcaccctggcgccggagctgttcgacagcgcggcctga
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