Meiothermus taiwanensis: Mtai_v1c12530
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Entry
Mtai_v1c12530 CDS
T05633
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mtai
Meiothermus taiwanensis
Pathway
mtai03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mtai00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Mtai_v1c12530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtai03021
]
Mtai_v1c12530
03400 DNA repair and recombination proteins [BR:
mtai03400
]
Mtai_v1c12530
Enzymes [BR:
mtai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Mtai_v1c12530
Transcription machinery [BR:
mtai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Mtai_v1c12530
DNA repair and recombination proteins [BR:
mtai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Mtai_v1c12530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
AWR86495
LinkDB
All DBs
Position
1278572..1281946
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AA seq
1124 aa
AA seq
DB search
MKIERFGKINEVIPLPPLTEIQVDSFTKALQADVPPSKRENIGLQAAFKETFPIEEGEKG
RGLVLDFLEYRLGEPPFDQDECREKDLTYQAPLYAKLLLVHKDTGLLKEDEVFLGDLPLM
TQDGSFIVNGADRVIVSQIHRSPGVYFTADQTRPGRFVASVIPLPKRGPWIDLEFEQSGV
VVMKVNKKKFPLALLLRVLGFTAEALGKELADYPDLLPGLLEAQFRGIKALEMGVDEALL
KLFTELRPGDPPKRDKAITYLHSLLSDPRRYDLGEAGKYKAQQKLGIQLSGRMLIRFENG
EFKDEALLPVLKYLFALQSGKPGYEADDIDHLGNRRIRTVGELLADQFRVGLSRLARGVR
ERMLLGSPESATPAKLVNNRPLVAAIREFFGRSQLSQFKDQTNPLSELRHKRRISALGPG
GLTRERAGFDVRDVHRTHYGRICPIETPEGANIGLISSLASFGRINDLGFILTPYRKVVG
GRVTDQVDFMTATEEDRYAIAQANTPLKPDGYFDTQQVVVRKKGEPMVMRPEEVEYMDVS
PKQIFSVNTNLIPFLEHDDANRALMGSNMQAQAVPLLRAQSPVVMTGVEERVVRDSLTSL
YSPVDGVVEYVDGSKILVRGEDKGLYEFNLRRFIRSNQGTALDQRPRVSKGQKVRKGELL
ADGPASEEGYLALGQNILLAIMPFDGYNYEDAIVISEDLLRRDFYTSVHIERYEIEARDT
KLGPERITRDIPNLSEAALRDLDEDGVVRIGAEVKAGDILVGRTSFKGETEPTPEERLLR
SIFGEKARDVKDTSLRVPPGEGGIVVRTLRLRRGDPGVELKPGVREVVRVYVAQKRKLQV
GDKLANRHGNKGVVSKILPPEDMPHMPDGTPVDIVLNPLGVPSRMNLGQILETHLGLAGY
ELGLKFITPVFDGITEEEIKQLLGKAFDKKWEARIQAGFGLDNREREVLARAAKLGLVSA
EASEVEQLREVFQQGKSVLYDGRTGEPIEAPIVVGVMYIMKLYHMVEDKMHARSTGPYSL
ITQQPLGGKAQFGGQRFGEMEVWALEAYGAAHTLQEILTIKSDDIEGRNAAYEAVVKGED
VPEASVPESFRVLVKELQSLGLDVETYDENSRHLDIFEGLASRR
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagagcggttcggcaagattaacgaagtcattccccttccacccctcaccgag
attcaggtcgactcgttcaccaaagccttacaggccgacgtacccccttccaagcgggaa
aacattggcctgcaagcggcttttaaagagaccttccccatcgaggagggtgagaagggg
cgggggctggtgctggattttctcgagtaccgcctgggtgaaccccccttcgatcaggac
gagtgccgggagaaagacctcacctaccaagcgccgctatacgccaaactgctgctggta
cataaggacaccggcttgctcaaggaagatgaagtctttctgggcgacctgcccctcatg
acccaggacggctcctttatcgtgaatggggccgatcgggtgatcgtttcacagatccac
cgctcgccaggggtgtacttcaccgcagaccagacgcgtccgggcaggttcgtggcctcg
gtgattcccctgcccaagcgcggcccctggattgacctcgagttcgagcagtccggggtg
gtggtgatgaaggtcaacaagaagaaattccccctggccctgctgctgcgggtgctgggt
tttaccgccgaggccctgggcaaggagctggccgattaccccgacctgctgccgggcctg
ctggaagcccagttccgtggaatcaaggcccttgagatgggggtggacgaggccctcctc
aagcttttcaccgagctgcgcccgggcgacccgcccaagcgcgataaggccatcacctac
ctgcactcgctgttgtctgacccgcgccgctacgatctgggtgaagcgggcaaatacaaa
gcccaacaaaagctgggtattcagctctcgggccgcatgctgattaggttcgaaaacggc
gagttcaaggacgaggccttgctgccggtgctcaagtacctgtttgctctgcagagcggg
aagcctggctatgaggccgacgacatcgaccacctgggcaaccgccgcattcgcacggtg
ggcgagctcttggccgaccagttccgggtggggctctcgcgcctggctcgaggggttcgt
gagcgtatgctgctgggctcccccgaaagcgccaccccggccaagctggtcaacaaccgc
ccgctggtggcagccatccgggagttttttggccgcagccagctcagccagttcaaagac
cagaccaaccccctctcggagctgcgccacaagcgtcgcatctctgccctggggccgggc
ggcctgacccgtgaacgggccggcttcgacgtgcgcgacgtgcaccgcacccactacggc
cgcatctgccccatcgaaacccccgaaggtgccaacatcggtctgatctcctcgctggcc
tcctttggccgcatcaacgatctgggctttatcctcaccccttaccgcaaggtggtgggc
gggcgggttaccgaccaggtcgacttcatgaccgctaccgaagaagaccgctacgccatt
gcccaggccaacacgcccctcaagcccgacggctacttcgatacccagcaggtggtggtg
cgcaagaagggcgagccgatggtcatgcgtccggaggaagtggaatacatggacgtttca
cccaagcagattttctcggtgaacaccaacctgattcccttcctcgagcacgacgacgcc
aaccgtgccctgatgggctcgaacatgcaggcccaggcggtgccgctcttgcgtgcacaa
agcccggtggtcatgaccggggtggaggagcgggtggtgcgcgactccctcacctcgctg
tattccccggtggatggggtggtggagtacgtggacggctccaaaatcctggtcaggggt
gaagacaagggcctgtacgagttcaatctgcgccgctttatccgttcgaaccagggcacg
gccctcgaccagcggcctcgagtctccaaaggccagaaggtgcgcaagggcgagctgctg
gccgatggcccggcctccgaggagggctacctggccttgggacaaaacatcctgctagcc
atcatgccctttgatggctacaactacgaagacgcgatcgtcatctccgaagatctcctg
cgccgcgacttctacacctcggtgcacatcgagcgctacgagatcgaggcccgcgacacc
aagctgggccccgagcgcatcacccgcgatatccccaacctctccgaagccgctttgcgc
gacctggacgaggacggcgtggtgcggattggggccgaggtcaaggccggggatatcctg
gtgggccgcaccagcttcaagggtgagaccgagcccacccccgaggagcggctgttgcgc
agcatcttcggggagaaggcccgcgacgtgaaggacacttccctgcgggtgccgcccggt
gaaggtggcatcgtggtgcgcaccctgcgcctgcgccggggcgaccctggggtggagctc
aagccgggtgtgcgcgaggtggtgcgggtgtatgtggcccagaaacgcaagcttcaggtg
ggcgacaagctggccaaccgccacggaaacaagggggtggtctccaagattctgccgccc
gaagatatgccgcacatgcccgacggcacgccggtggatatcgtgctcaacccgctgggc
gtacccagccgtatgaacctgggccagatcctggaaacccacctggggctggcgggttac
gagctgggcctgaagtttattaccccggtatttgatggtattaccgaggaagagatcaag
cagctgctgggcaaggccttcgataagaagtgggaagcccgcatccaggctggttttggc
ctggataaccgcgagcgggaggtgctggctcgagccgccaagctggggctggtgagtgcc
gaggccagtgaggtggagcagctgcgtgaggtgttccagcagggtaagagcgtgctttac
gacggccgcacgggtgagcccatcgaggccccaattgtggtgggcgtgatgtacatcatg
aagctttaccacatggtggaagacaagatgcacgcgcgctccactggcccctactcgctc
atcacccagcagcccctgggtggcaaggcccagtttggtgggcagcgcttcggggagatg
gaggtgtgggcgctggaggcctacggagcggcccataccttgcaggaaatcctcaccatc
aaatccgacgatattgaagggcgcaacgcggcttacgaggccgtggtcaagggcgaggat
gtgcccgaggccagcgtgccggagagcttcagggtgctggtgaaggagttgcagtcgctg
ggtctggatgtggagacctacgacgaaaattcccgccacctggatatctttgaagggctg
gccagcaggcgatag
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