Meiothermus taiwanensis: Mtai_v1c12540
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Entry
Mtai_v1c12540 CDS
T05633
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mtai
Meiothermus taiwanensis
Pathway
mtai03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mtai00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Mtai_v1c12540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtai03021
]
Mtai_v1c12540
03400 DNA repair and recombination proteins [BR:
mtai03400
]
Mtai_v1c12540
Enzymes [BR:
mtai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Mtai_v1c12540
Transcription machinery [BR:
mtai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Mtai_v1c12540
DNA repair and recombination proteins [BR:
mtai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Mtai_v1c12540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RPOC_hybrid
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Peptidase_M23
Caudo_TAP
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
AWR86496
LinkDB
All DBs
Position
1282037..1286617
Genome browser
AA seq
1526 aa
AA seq
DB search
MIKREVRKVRIGLASPEKIRSWSYGEVEKPETINYRTLKPERDGLFDERIFGPQKDYECA
CGKYKRQRFEGKVCERCGVEVTKSIVRRYRMGHVELATPVAHIWYVKDVPSKIGTLLDLS
AQELEQVLYFAKYITIDPKGAMLGGVPVQKRQLLTDDEYRELRFGRQETYTIPAGVETFV
KDGDEVKKGQELAPGVVSKMDGLVLFRFPRRIRLEYIETERASLTLPKAAWIEQETYKPG
EPLAELEDSYQIVSEHAGVVKVEEIGDGALLHILDPDNEDLVATYLIPAGMHLKVGQGEL
VGNGDVLAQGKGQLRMPRGRKVVKLVADASKKEVHLSLTLERVRVVDYPLQPHMHVLVGE
GTQVRKGDKLVGAIEPEEEVYAEADGVVHLHEPASIVVMKAKLYPFEDDVEVTNGDRVSP
GDALADGGKVTSEIYGRVEVDFIRMAVRVIESYDIDAKMGAQAIQELLKEIDLGVLEAEL
VEEMKHPSRARRAKARKRLEVVRAFRDSGNRPEWMILEAVPVLPPDLRPMVQVDGGRFAT
SDLNDLYRRLINRNNRLKKLLSQGAPEMIIRNEKRMLQEAVDALLDNGRRGTPVTNPGSD
RALRSLTDILSGKQGRFRQNLLGKRVDYSGRSVIVVGPQLKLHQCGLPKRMALELFKPFL
LKKMEEKGIANNVKSARKMLERSRDIKDEVWDALEEVIHGKVVLLNRAPTLHRLGIQAFQ
PVLVEGQSIQLHPLVCEAFNADFDGDQMAVHVPLSSYAQAEARVQMLSSHNILSPASGEP
VAKPARDIILGLYYITQLRREKKGQGLEFATPEEAIQAYEEGRVALNARIKVAGKETSVG
CLKYVFSSIDEALLAVQSGVVDHQDVVTVRLGDKLLETSPGRMLFLRIVSEAIEDPEKAQ
ELVNLEVAQEKNSLKDLVYKSFLLLGIEKTAKLLDALKYYGFVLSTTSGITIGIDDAVIP
AEKKQYLQEADAKLAQIEQAFEMGMMTEEERFQQILQLWSQTTEKVTSAVFKNFEENYPF
NPLYVMSQSGARGNPQQIRQISGMRGLMAKPSGETYPVPVKASFREGLTVLEYFISTHGA
RKGGADTALRTADSGYLTRKLHDVAHEVIVREADCGTPDYISVPLLQFDEAFRNKRLRKK
SDIESGLYGRTLAREIEVRGRVFPEGHQLSLEDVGFIIKAAEERLIEEVPVRSPLTCRTR
YGVCQQCYGWDLSAAKLVSIGESVGVVAAESIGEPGTQLTMRTFHTGGVATGTDITQGLP
RVIELFEARRPKVKAVIAEIDGTVHIEELEDKVIIYVTSEGFSKEYKVPKDARITVKEGE
TVEAGQPLTRGAIDPHQLLEAKGPEAVERYLTDEIQRVYRAQGVKLHDKHIEVIVRQMLK
YVEITDPGDSRYLEGQVIEKWDVESANEALMAEGKTPASWKPVLMGVTKSALSTKSWLSA
ASFQHTTHVLTEAAIAGKLDELIGLKENVILGKLIPAGTGSDFVRGTQVVDQKTLKRLEE
ARREAEQAPLAPRRPGVRPEQPVREA
NT seq
4581 nt
NT seq
+upstream
nt +downstream
nt
atgattaaacgagaagttcgtaaggtacgaatcggcctggcctcccccgagaagattcgg
agctggagctatggtgaggttgaaaaacccgagaccatcaactaccgcaccctgaagcct
gagcgcgacgggctttttgacgagcgcatcttcgggccgcaaaaggactacgagtgcgcc
tgcggcaagtacaagcggcagcgcttcgaggggaaggtgtgcgagcgctgtggggtggag
gttaccaagagcatcgtgcggcgctaccgcatgggccatgtggagcttgctaccccggtg
gcccacatctggtacgtcaaggacgtacccagcaagatcggcaccctactcgacctgtcg
gcccaggagctcgagcaggtgctgtactttgccaagtacatcaccatcgatcccaaaggg
gccatgctgggcggtgtgccggtgcaaaagcgccagctcctcaccgacgacgagtaccgc
gagctgcgctttggccgtcaggaaacctacaccatcccagccggggttgagacctttgtc
aaagacggggacgaggtgaagaagggccaggaactggcccccggtgtggtgagcaagatg
gacgggctggtgctcttccgcttcccccgccgcatccgcctggagtacatcgagaccgag
cgggccagcctgaccctgcccaaggcagcctggattgaacaggagacctacaagccgggt
gagcccctggccgagctcgaggactcctaccagatcgtgagcgagcacgcgggcgtggtg
aaggtggaggagatcggcgatggggccctgctgcacatcctcgacccggataacgaagac
cttgtcgccacctacctcatccctgccggtatgcacctcaaggtagggcagggtgagctg
gttggtaacggcgatgtgctggcccagggcaaggggcagctccggatgccccggggccgc
aaggttgtaaagctggtggccgatgcctccaaaaaagaggtgcatctcagccttaccctc
gagcgcgtccgggtggtggactaccccctccagccccatatgcacgtgctggtgggggag
ggcacccaggtacgcaaaggcgacaagctggtgggggccattgagccggaggaagaggtc
tacgccgaggccgacggggtggtgcacctgcacgagccggcctccatcgtggtgatgaag
gccaagctctaccccttcgaagacgatgtggaggtgaccaacggtgaccgggtctcgccc
ggcgatgccctggccgatggcggcaaggtgacctcggagatctacggccgggtggaggtg
gacttcatccgcatggcggtgcgggtgatcgagtcctacgacatcgacgccaagatgggg
gcccaggccattcaggagctgctcaaggagattgacctgggcgtgctcgaggccgagctg
gtcgaagagatgaaacaccccagccgggcccggcgggccaaggctagaaaacgcctggag
gtggtacgggccttccgcgactccggcaaccgccccgagtggatgatcctcgaggccgtg
ccggtgctgccgcccgacctgcgccccatggtgcaggtggacggcgggcgttttgctacc
tccgacctcaacgacctctaccgccgcctgatcaaccgcaacaaccgcctgaaaaagctc
ctctcgcagggtgcgcccgagatgatcatccgcaacgagaagcggatgctgcaggaagcc
gtggatgccctgctggacaacgggcgccggggcacgccggtcaccaaccccggctccgac
cgggccctgcgctccctcaccgacatcctctcgggcaagcagggccgcttccgccagaac
ctgctgggcaagcgcgtggactactcgggccgctcggtgattgtggtggggccgcagctc
aaactgcaccagtgcggcctgcccaagcgcatggccctggagctcttcaagccctttttg
ctcaagaaaatggaggagaagggcatcgccaacaacgtcaagagcgcccgcaagatgctg
gagcgttcccgtgacatcaaagacgaggtctgggacgctttggaagaggtcatccacggc
aaggtggtgctcctgaaccgtgcccccaccctgcaccgcctgggcattcaggccttccag
ccggttctggtggaggggcagagcatccagctgcaccccttggtctgtgaggccttcaac
gccgacttcgacggcgaccagatggccgtgcacgtgccgctgtccagctacgcccaggcc
gaggcccgcgtgcagatgctctcctcgcacaacatcctctcgccggcctcgggggagccg
gtggccaagccggcccgcgatatcatcctgggcctgtactacatcacccagctgcgccgt
gagaagaagggccagggcctggagttcgctactcccgaggaggccatccaggcctatgag
gaaggccgggtggccctcaacgcccggatcaaggtggccggcaaggagaccagcgtgggc
tgcctgaagtacgtcttcagcagcatcgacgaggccctgctggccgtgcagagcggggtg
gtggatcaccaggacgtggtcacggtgcgcctgggcgacaagcttttggaaacctcgccg
ggccggatgctcttcctgcggattgtgagcgaggccatcgaggaccccgagaaggcccag
gagctggtgaacctcgaggtggcccaggagaagaactcgctcaaagacctggtctacaag
agcttcctgctgctggggatcgagaaaaccgccaaactgctggacgccctcaagtactac
ggctttgtgctttccaccacctcgggcatcaccatcgggatcgacgatgcggtgatcccg
gcggagaagaagcagtacctgcaggaggccgatgccaagctggcccagatcgagcaggcc
ttcgagatgggcatgatgaccgaggaggagcgcttccagcagattctgcagctctggagc
cagaccaccgagaaggtcaccagcgcggtgttcaagaacttcgaggaaaactaccccttc
aacccgctttatgtgatgagccagtcgggggcccgggggaacccccagcagatccgccag
atctccgggatgcgcggcctgatggccaagccctccggcgagacctacccggtgccggtc
aaggcctccttccgcgagggtctcacggtgctggagtacttcatctccacccacggggct
cgtaagggtggggccgacaccgcgctgcgcaccgccgactccgggtatctcacccgcaag
ctgcacgacgtggcccacgaggtgatcgtgcgggaggccgactgcggcacgcccgactac
atctcggtgcccctcctgcagttcgacgaggccttccgcaacaagcgcctgcgcaagaag
agcgacatcgagtcgggcctgtacggccgcaccctggcccgcgagatcgaagtgaggggc
cgggtcttccccgaggggcaccagctcagcctcgaggacgtgggcttcatcatcaaggcc
gccgaagagcgcctgatcgaggaggtgccggtgcgctcgcccctgacctgccgcacccgc
tacggggtctgccagcagtgctacggctgggatctgtcggcggccaagctggtctcgatc
ggcgagagcgtgggggtggtggccgccgagtccatcggcgagcccggcacccagctcacc
atgcgcaccttccacaccggcggtgtggccactggcaccgacatcacccagggtctgccc
cgtgtgatcgagctctttgaggcccgccggcccaaggtcaaggcggtcatcgccgagatc
gacggaaccgtgcacatcgaggagctcgaggacaaggtgatcatctacgtcaccagcgag
ggcttctccaaggagtacaaggtgcccaaggacgcccgtattaccgtcaaggagggcgaa
acggtggaggccggccagcccctgacccgtggggccattgacccccaccagcttctggag
gccaaaggccccgaggcggtggagcgctacctgaccgacgagatccagcgcgtctaccgg
gcccagggcgtgaagctgcacgacaagcacatcgaggtcatcgtgcggcagatgctcaag
tacgtcgagatcaccgaccccggcgatagccgctacctggagggccaggtcatcgagaag
tgggatgtggaatcggccaacgaagccctgatggccgaaggcaagaccccggccagctgg
aagcccgtgctgatgggggtgaccaagagcgccctctccaccaagagctggctctcggcg
gccagcttccagcacaccacccacgtgctcaccgaggccgccattgccggcaagctcgac
gagctcattggcctgaaggagaacgtgatcctgggcaagctgattcccgccggtaccggc
tccgacttcgtgcgcggcacccaggtggtggatcagaagaccctcaagcgcctcgaggag
gcccgccgcgaagccgagcaagcgcccctggccccgcgccgtccgggggtgcgtccggaa
caacccgtgcgcgaagcctaa
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