Meiothermus taiwanensis: Mtai_v1c28430
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Entry
Mtai_v1c28430 CDS
T05633
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mtai
Meiothermus taiwanensis
Pathway
mtai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mtai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mtai_v1c28430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtai03019
]
Mtai_v1c28430
03400 DNA repair and recombination proteins [BR:
mtai03400
]
Mtai_v1c28430
Enzymes [BR:
mtai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mtai_v1c28430
Messenger RNA biogenesis [BR:
mtai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mtai_v1c28430
DNA repair and recombination proteins [BR:
mtai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Mtai_v1c28430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Helicase_C_2
RNase_T
ResIII
RecQ_Zn_bind
DEAD_2
RQC
Motif
Other DBs
NCBI-ProteinID:
AWR88066
UniProt:
A0A399E5G4
LinkDB
All DBs
Position
pMtWR-220:complement(130189..135177)
Genome browser
AA seq
1662 aa
AA seq
DB search
MKTFVAFDLEATSTDAKAAEILEIAAQDVEGRTFHRYVATSEDLDAEHDAFHFTGIPFDE
YEREKMPLEAVLRDFLSFLGDRPLLGHNLLHYDLPVLERALSAVGMELLPAARSALDTLR
LAHLVFPTPPEGLAGYRLGDLYAYFTKEELKDAHRAQADVEATWRVLSGLLLQKLPDGLA
RAWRELNLIEGELFPDTPGLVKDLLATPALVKLIDYRGSALPSPANLGEDLLPKRREAQM
QMFEKVQGALRSGHRILLEAPTGTGKTKGYLYPALHVGEKTWVATHTKVLQLQALKELEE
VGKRGYAVRAALVKSPKDTLCPEALFDLFLDAREEDEEDFRAAVGLLLHYAALGGHDLEA
LPRYWHSSKGFREAKDRVGTNPRRCRADCPFFHTCAFQRQLAHRKGAQILVTNQAYLLAN
FLSQDEPDAVEDQAHLVLDEAHHLEDVATEALTQALGYEDFIHQLNRLAHPQKERGLLRD
GRRLQELSEEERGRAKEIVQKLLPSVHEALKSYTDHLVDFIKNRGTGDPRYGITLGVSSQ
WKRLEEWPLINREEQALIGALIELKKALEEIGQNPTGFVARELAPIKQFLKDALGLLFER
RRVLGLASGEPDQNLLHLSEWDPTTESWRHLAQPIDVSRELKTGLWPRFKGVVLTSATLS
VPTKDDPEGFDLFKRVLGLKNALSKRLPPSLPYEKAHLLVPRHLPEARESTLPRFQRMLH
EELKTLLPLSHRSLSLFTSLKRLEDAKGALDSLPNILAPLTRKEREDVASRIKQDPEAPV
AALGSRSYMEGVDFPALKLVNLERIPFPLPSLLLTRRMEWVYEQGLDKWWDYYLPKAALS
FAQAFGRLIRDQRERAGDGAFVLWDKKLLNAAYQGIFYRALPPGVHRHILEDRKNFYDQI
ARILQVDRAWLPQDELEEETLRRLREILLAGLEPIEKARRVAREVYELKVDEERWAKQAE
AIQAALDGEDLVALLPTGFGKSLAFQLPALMQGGLTLVVSPLVALMKDQTDRLLEMGLPV
GAIHSLMGSGEQRSMLDEVRSGRVRLLYVSPERLNRSEALWKLLQEKHAAGELRRVVFDE
AHCLVEWGFDFRPDYLKALEKLKDLQGVPRSFFTATLTPEDLRRLEKAAGLAAHRLIKPQ
SFHRPNLRFVVRKVQGEAGKFQVLAKALAWLTEKGEGGSAIVYTSTRAEAERLAWALGRL
FPDLTVEAYHAGLGPVPRREAQERFTEGKTRVMVATTAFGMGIDKPDIRLVVHWRPPRSL
EEYIQQSGRAGRDGKEAYCLLLYTKGDWGFLEWTLGLGHGGRAHEEFARRLIRLLEERRT
LVGYRQEIYREIYEEPEEGEIEEELPEGDEEEEVTAPSRWEVGLDNLERVLTSLERAGVL
EYDFLPGKALLLESRDVLEKHLPQEALAVLHRAGYEGSERGDELDFSRISLEEALELDRR
LYQLFRQQNIYLYHYREPLLHIRMGGRLKDGYFDWHEEQEKLRARSKERLRKVQVYAENG
RCRAQVLLKHLGESPGSCGDCDICTKNAGPWEALEGVDEEELERAYRPMDTLLAYFALAE
KNAWSQEARYMYLGRRSTLMALRGKDRGKSGALGRKYTDNRFFGHLSFIKPRELERAFEE
ALRKGYLEVKGVYEANQLYGLTEKGRRHYERWQRREVGDVGA
NT seq
4989 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacttttgtagcgtttgatcttgaggctacctctaccgacgcaaaagcggctgaa
attctggaaattgctgcacaggatgtggaaggtagaaccttccaccgttacgtggccact
tcagaagacctcgatgctgagcacgatgcttttcactttactggcattccctttgatgag
tatgagcgagaaaagatgcctttggaggcggtgctacgggacttccttagctttcttggg
gatcgtcctttgctgggccacaacctgttgcactacgacctgcccgtgctcgagcgcgcc
ttatcagcggttgggatggagcttctcccggccgcaaggtccgcgctggatacccttcga
ctggcccatctggttttccccacgccaccggaaggacttgcaggctaccgcttgggggac
ctctacgcgtatttcacaaaggaagaactgaaggatgctcaccgcgcccaggccgatgtc
gaggcgacctggcgcgtactctccggtttgctgctgcaaaagctgccagatggtctggct
cgagcctggcgggaactgaacctgattgaaggagagctttttcctgataccccggggctg
gtcaaggatctccttgccaccccagcgctggtaaagctgatcgactacagaggatcggcc
ctgccatcccctgccaacctgggcgaggatctgcttcccaagcggagggaggcgcagatg
cagatgttcgagaaggtgcagggggccttgcgatccgggcatcgaatcctgcttgaggcg
cctacaggtaccggtaagaccaagggctacctttatccggcccttcatgtgggggaaaaa
acctgggtggccacccacactaaagtgctccagctccaggccctgaaagagctcgaggag
gtgggaaagaggggctatgccgttcgcgcagcgctggtgaagagccccaaagacaccctc
tgccccgaggccctgttcgatctttttctggacgccagggaagaggacgaagaggatttc
agggccgcagtgggcctcctcctgcactacgcggccctgggtgggcacgacctcgaggcc
cttccccgctactggcattcctccaagggcttccgcgaagcaaaagaccgcgtgggcacc
aacccccgccgctgccgggcagactgccccttcttccacacctgtgcctttcagcgccag
ctcgcgcaccgcaagggagcgcagatcctggtaaccaaccaggcttacctgctggccaac
tttctgagccaggatgaacccgatgcggtcgaagaccaggcccatctggtgctcgacgag
gcccatcacctggaggatgttgccacggaggcgctgacccaggccctgggttacgaggac
ttcatccaccagctcaaccgcctggcccacccccagaaggagcggggcctgctcagggac
ggccggcggctgcaggagcttagcgaggaggagagaggcagggccaaggagatagtccag
aagcttctacccagcgtgcacgaggcgctcaagagctacaccgaccaccttgtggacttc
atcaagaaccgaggcaccggggatccgcgctatggcatcaccctgggggttagcagccag
tggaagcggctcgaggagtggcccctcatcaatcgcgaggagcaagcgctgataggggcc
ttgatcgagctgaaaaaagcactggaggagatcggccagaaccccacggggttcgtggcc
cgtgagcttgcgcccataaaacagtttctgaaggacgccctggggcttttatttgagcgc
cgccgggtgctgggcctggcctctggggagccggatcagaaccttctccacctctctgag
tgggatcccaccaccgagagctggcggcacctggcgcagcccatcgacgtttcccgggag
ctgaaaaccggcctgtggcctcgcttcaaaggcgttgtgctgaccagcgcaaccctgagc
gtacccaccaaggacgaccccgagggcttcgacctgttcaagcgcgtgctgggcctaaaa
aacgctctttccaagcggctaccgccctcccttccctacgagaaggcccacctgctggtg
ccgcgccacctcccagaggcccgcgaaagcacgctgccgcgctttcagcgcatgttgcac
gaggaactgaagaccctgctgcctttgtcccaccgcagcctttcccttttcaccagcctc
aagcgcctggaagacgccaaaggcgccctggacagcctgcccaacatcctggcccccctg
acccggaaggaacgagaggacgtggccagccgcatcaagcaggaccccgaggccccggtg
gccgccctgggctcccgcagctacatggagggggtggatttccctgccttgaagctggtg
aacctcgagcgcatccccttccccctgccttccttgctgctcaccaggcggatggagtgg
gtctatgagcaggggttggataagtggtgggactactaccttccaaaagcggcgctctcc
tttgcccaggcctttggccggctgatccgcgaccagcgcgagcgggcgggggatggggct
tttgtcctgtgggataagaagctgctcaatgctgcctaccaggggatcttctatcgcgcc
ctgccccctggcgtacaccggcacatcctcgaggatagaaagaatttttacgaccagatc
gcaagaatcctgcaggtggatcgggcctggctcccccaggacgaactggaagaagagacg
ctgcgcaggctcagggaaattctgctggccggcctcgagcccatcgaaaaagcccgccgc
gttgccagagaggtctacgaactcaaagtggacgaggaacgctgggccaagcaggccgaa
gccatacaggctgcgctggatggggaagacctggtggctttgttgcccacgggctttggt
aagagcctggcctttcaactcccggccctcatgcagggcgggcttaccctggtggtttca
ccgctggtcgccctgatgaaagaccagaccgaccgcttgctggagatggggttgccggtc
ggggcgattcattcgctgatgggctccggggagcagcgcagcatgctggatgaggtgaga
tcgggccgggtacggctcctctacgtaagcccggagcggctcaaccggagcgaggcgctg
tggaagctgctccaggagaagcacgcggcaggggagctgaggcgggtggtcttcgacgag
gcccactgcctggtggagtggggcttcgacttccggcccgactacctcaaggcgctggaa
aagctaaaggatttgcagggggttcccaggagcttcttcaccgccacgctcacgccggaa
gacctcagaagactggagaaggcggcagggctggcggcccacaggttgatcaaaccgcag
agcttccaccgccccaacctccgctttgtggtgaggaaagtgcagggggaggcgggcaag
ttccaggttctggccaaggccctggcctggctaacagagaaaggggaggggggcagcgcc
atcgtctacacctccacccgtgctgaggccgagcgcttggcgtgggccctgggccgcctt
ttccccgacctgacggtggaggcctaccacgcggggctgggcccggtgccccggcgcgag
gcccaggaacgcttcacggaggggaagacccgggtcatggtcgccaccaccgccttcggt
atgggcatcgacaagccggacatccggctggtggtccactggcggcccccgcgcagccta
gaggagtacatccagcagtcggggcgtgcgggacgcgatggaaaggaggcctactgcctg
ctcttgtataccaagggggactggggatttctggagtggacgctggggttgggccacggt
gggcgggcccatgaggagtttgcccggcggctcatccgccttttggaggagagaagaacc
ctggtgggctaccgccaggagatttaccgggaaatttacgaagagcctgaggaaggagag
atcgaggaggagctgcctgagggagacgaagaggaagaggtgaccgcaccctcccggtgg
gaggtgggcctggataacctcgagcgcgtcctcaccagcctcgagcgggctggtgttctg
gaatatgactttctaccgggcaaggccctcctgctggagtccagggacgtcttggagaag
cacctgccgcaggaagccctggccgtgcttcacagggccggttacgagggtagcgagcga
ggggatgagctggacttctcgcgtatttccctggaggaagccctggagctggatcggagg
ctgtaccagctcttccggcagcaaaatatctacctctaccactaccgggagcccctgctt
cacattcggatgggcggtcgtctaaaggacggctactttgactggcacgaggagcaggaa
aagttaagggctcgttcaaaggagcgcctccgcaaggtgcaggtttacgccgagaatgga
cggtgccgcgcccaagttctcctcaaacatctgggcgagtccccaggcagctgtggggac
tgtgacatctgcaccaagaatgccggtccctgggaggctttggaaggagtagatgaagag
gagctcgagcgggcctaccgccccatggacaccctgctggcttactttgctttggcggag
aaaaacgcctggtcgcaggaggcccgctacatgtatttgggccggcgcagcaccctgatg
gccctgcgcggcaaggatcggggcaagagcggcgccctgggccgcaagtacacggacaac
cgcttctttggccatctctctttcatcaagccccgggagctggagcgggcctttgaggaa
gccctgaggaaggggtacctcgaggtcaagggggtgtatgaggccaatcagctatacggc
ctgaccgagaaaggaaggagacactacgagcgctggcaaaggcgggaggtaggggatgtc
ggagcttga
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