Candidatus Moanibacter tarae: DF168_01331
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Entry
DF168_01331 CDS
T09872
Symbol
rho_1
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mtar
Candidatus Moanibacter tarae
Pathway
mtar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mtar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DF168_01331 (rho_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtar03021
]
DF168_01331 (rho_1)
03019 Messenger RNA biogenesis [BR:
mtar03019
]
DF168_01331 (rho_1)
Transcription machinery [BR:
mtar03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
DF168_01331 (rho_1)
Messenger RNA biogenesis [BR:
mtar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DF168_01331 (rho_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
AAA_22
AAA_25
AAA
SAP
Spore_III_AA
ATPase_2
Glyco_tranf_2_3
Motif
Other DBs
NCBI-ProteinID:
AWT60130
UniProt:
A0A2Z4AM36
LinkDB
All DBs
Position
complement(1510464..1512140)
Genome browser
AA seq
558 aa
AA seq
DB search
MSNNEESNKEEVVLESDSGRNVISTNTPSEEPVISDQKGEQRENHRRLGGDTAKGRRNTN
EGNRRGSRGQSGERRSPNNRSLMPRKKQKRKPRGRPQRGLQEIENGIGTNIGNLTGYDFL
SNLEEMEILSQEHSTGGSPLLVTPLLNMSLVELVEEAKALGVSTNGVPNRNMLIDEVIRT
GFERRVPIVMRGVLEITDQGFGLIVFENDNYRIRPYSAFVSAGLIKQYGLKRGQILDTQV
HPHREGESCPFVIKLISVMDDAMAKNQGVAPFEDLIPYYPLERILLESNSDVGWDNLSMR
IVDLLTPIGLGQRGLIVAPPRTGKTVLLQCIANAIALNNPDVHLIVLLVDERPEEVTDFK
RQVVGEVVSSTFDQSAESHVHAAEMVIEKSRRMVEDSRDVVVLLDSITRLARAYNTLRPS
SGKILSGGVEASALQKPKRFFGSARNIEGGGSLTIIGTALIETGSRMDEVIFEEFKGTGN
MELHLDRALVDKRMYPAINLERSGTRKEELLYHLDEMNKIYSLRRVMKGVPSTEAMEMLI
QRVKKTKTNAEFLMGLNR
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaataacgaagaaagcaacaaagaggaagttgtcctcgaatccgattctggaagg
aatgtaatctcaacgaatactccttccgaggagcccgttataagtgatcagaaaggagaa
caacgcgaaaatcacaggaggctaggtggagatacagcgaagggtcgtagaaatacgaat
gagggaaacagaagaggatcacgagggcagtcaggagaaaggagatcgcctaataaccgg
tcgttgatgccaagaaagaagcaaaagaggaagcctcgcggacgtccgcagcgcggcctg
caagagattgaaaatgggattggaacaaatattggcaatctgaccggatatgacttccta
agcaacctggaagagatggaaatcttgtcacaggagcattcgaccggggggagtccactt
ctggtgactccacttttgaacatgtctcttgtggaattggtggaggaggctaaggcactt
ggagtttcgacaaatggagttcccaatcggaacatgctgatcgatgaggtgattcgaaca
gggttcgagcgccgagtgccaattgtgatgagaggagtattagagattacggatcaggga
tttgggctgattgtcttcgaaaatgataactatcgtatacggccctacagtgcctttgtg
tcagctggcttaattaagcaatatgggctgaaaagaggacagatcctagatacccaagtg
catccccatcgggaaggggagagctgccctttcgtcatcaagttaatctcggttatggat
gatgcaatggcgaaaaatcagggggtagcgccgtttgaggacctgatcccctattatccg
cttgagcgcattcttctggagagtaattccgatgtaggctgggacaacctctcaatgcgt
atcgttgatttactgactccgatcggcttggggcaaagggggcttatcgttgcaccaccg
aggactgggaaaacagtactccttcaatgtattgcgaatgccatcgcattgaacaacccg
gatgttcaccttattgtcctactcgttgatgagcggccagaggaggtcacggattttaag
cggcaggttgtaggcgaggttgtgagctcgactttcgatcaatcggccgagagccacgtg
catgctgcagagatggtgatcgaaaaatcccggagaatggtggaagattcgcgagatgtc
gttgttctgctcgattctattacccggctggcgagagcatacaatactcttcgccccagt
agtggtaaaattctctcgggaggagtggaagcgagtgcactccaaaagccaaaaagattt
tttggctcggctcgtaatatcgaaggaggagggagtttgaccattattggaaccgccttg
attgagaccggcagtcggatggacgaagtgatatttgaggaattcaaaggaaccgggaat
atggagctgcatttggatcgggctttggtcgacaaacggatgtatccagcaattaatttg
gaacgaagtgggacgcgaaaggaggagcttctctatcatctggatgagatgaataaaatc
tattctttgcgtcgagtaatgaagggggttccttccacagaggctatggagatgcttatc
caacgagttaagaagacgaagaccaatgcagaatttctaatgggactaaaccgatag
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