Candidatus Moanibacter tarae: DF168_01895
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Entry
DF168_01895 CDS
T09872
Symbol
rho_2
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mtar
Candidatus Moanibacter tarae
Pathway
mtar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mtar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DF168_01895 (rho_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtar03021
]
DF168_01895 (rho_2)
03019 Messenger RNA biogenesis [BR:
mtar03019
]
DF168_01895 (rho_2)
Transcription machinery [BR:
mtar03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
DF168_01895 (rho_2)
Messenger RNA biogenesis [BR:
mtar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DF168_01895 (rho_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Spore_III_AA
AAA_25
NACHT
AAA_22
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
AWT60677
UniProt:
A0A2Z4AKC3
LinkDB
All DBs
Position
complement(2178383..2179513)
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AA seq
376 aa
AA seq
DB search
MHENITQSKNIRVEGIFEPQQNKSGQLLNPEHNGKSRRNDPFLPRDLVNRFKIKTGSWIV
GQAQEEDRFPNPKIRYVESIDGLAVEERQKVADFSQLTTITPDQWLRLETLDGAMTVRMM
DIFCPIGRGQRGLIVAPPRTGKTTLLRDIALGVLENHADCHVMILLVDERPEEVTDIQRS
VPAELFASSNDEDLKNHLRVANIAIDRAKRLAEVGKDVVLLLDSLTRLARAHNSAKGGSG
RTMTGGLDIRALEKPRQLFSTARNTEEAGSITIIASALVDTGSRMDDLIFQEFKGTGNME
MVLDRKVADLRLWPAIDIASSGTRREELLLDSKRLDRCHFFRRALVNMKVDEAAETATTR
LAKTDSNDKFLEMIEI
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgcacgagaatatcacacagtccaaaaacatccgagttgaaggcatctttgaaccgcaa
cagaataagtcggggcaattgcttaatccagaacataatgggaaatcgcgaaggaatgac
cctttcctgccccgcgacttggtaaaccgatttaaaattaagacgggtagctggatagtt
ggacaagcacaggaggaggatcgatttcccaatccaaaaatccgctatgttgagagcatc
gatggtttggcagtagaggaacgacaaaaggtagctgatttcagccaacttacgacgatt
actccagaccaatggcttcggttggagacattagatggagcaatgacagtacgtatgatg
gacatattttgcccaattgggcggggacagagaggtcttattgttgctccacctagaacc
ggtaaaactactttgctgagagatattgcccttggggttctggaaaatcatgcagattgt
catgtaatgatcctacttgtcgatgagcggcctgaggaggtcacagacattcagcgcagc
gtgccggctgaattgttcgcctcttctaacgatgaagatctgaagaaccatcttcgtgta
gccaacattgcgatcgatcgtgcgaagagattagctgaagtaggaaaggatgttgtctta
ctgcttgattcccttactcgccttgcgcgggcccataattcggctaagggtggtagcgga
agaacgatgactggaggactcgacatccgtgccctggaaaagccgaggcagcttttttcg
accgcacggaataccgaggaggctgggagcattacgataatagcctcagcgttggtcgac
actggtagtcggatggatgatctcattttccaggaatttaagggaacagggaatatggag
atggtcctcgatcgaaaagtagccgacctgcgattatggcccgcaatagacattgcgtcc
tctgggacaaggagagaggagctcctactcgattcaaaaagactcgaccgctgtcatttt
tttcgtcgtgccctcgtgaatatgaaagttgatgaagcagccgaaaccgcgactaccaga
ctggctaagacagattcaaatgataagttcctcgagatgatcgaaatttaa
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