Mycobacterium tuberculosis CDC1551: MT1336
Help
Entry
MT1336 CDS
T00053
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mtc
Mycobacterium tuberculosis CDC1551
Pathway
mtc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mtc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MT1336 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtc03021
]
MT1336 (rho)
03019 Messenger RNA biogenesis [BR:
mtc03019
]
MT1336 (rho)
Transcription machinery [BR:
mtc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MT1336 (rho)
Messenger RNA biogenesis [BR:
mtc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MT1336 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
AAA_22
VWA_2
CoV_NSP2_C
HNF-1_N
PIP5K
Motif
Other DBs
NCBI-ProteinID:
AAK45598
UniProt:
P9WHF2
LinkDB
All DBs
Position
1452745..1454553
Genome browser
AA seq
602 aa
AA seq
DB search
MTDTDLITAGESTDGKPSDAAATDPPDLNADEPAGSLATMVLPELRALANRAGVKGTSGM
RKNELIAAIEEIRRQANGAPAVDRSAQEHDKGDRPPSSEAPATQGEQTPTEQIDSQSQQV
RPERRSATREAGPSGSGERAGTAADDTDNRQGGQQDAKTEERGTDAGGDQGGDQQASGGQ
QARGDEDGEARQGRRGRRFRDRRRRGERSGDGAEAELREDDVVQPVAGILDVLDNYAFVR
TSGYLPGPHDVYVSMNMVRKNGMRRGDAVTGAVRVPKEGEQPNQRQKFNPLVRLDSINGG
SVEDAKKRPEFGKLTPLYPNQRLRLETSTERLTTRVIDLIMPIGKGQRALIVSPPKAGKT
TILQDIANAITRNNPECHLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPSDHTSVAEL
AIERAKRLVEQGKDVVVLLDSITRLGRAYNNASPASGRILSGGVDSTALYPPKRFLGAAR
NIEEGGSLTIIATAMVETGSTGDTVIFEEFKGTGNAELKLDRKIAERRVFPAVDVNPSGT
RKDELLLSPDEFAIVHKLRRVLSGLDSHQAIDLLMSQLRKTKNNYEFLVQVSKTTPGSMD
SD
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatacggacctcattacggctggcgaaagtaccgacggcaagccgtcggatgcc
gctgccacagatcccccagacctcaacgccgacgagccggccggctcgctggccaccatg
gtgctgcccgaactgcgtgcgctggctaatcgagccggcgtgaagggaacatcgggtatg
cggaagaacgaactgatcgctgcgattgaggagatcaggcgacaggccaacggcgcccca
gccgttgaccggtcggctcaagagcacgacaagggcgaccggccgcccagttccgaggca
ccggccacccagggggaacagaccccgaccgaacagatcgattcccaaagccaacaggtc
cgcccggagcggcgcagcgccacccgtgaagcgggaccctccggctccggtgagcgtgcg
ggcacagccgcagacgacaccgacaaccgccaaggcggtcaacaggacgccaagaccgag
gagcgtggcaccgacgcgggtggcgaccaagggggtgaccagcaggcttcgggcggtcag
caggcgcgcggcgacgaggacggagaagcgcgtcagggccggcgcggacgccggttccgc
gatcggcggcgccgcggtgaacgatccggcgacggcgccgaggctgaactgcgtgaggac
gacgtcgtccagccggtagccggcatactcgacgtcctggacaactacgcgtttgtgcgc
acctccggctacctacccggtccgcacgacgtgtatgtgtcgatgaacatggtgcgcaag
aacggcatgcgccgtggtgatgcggtgaccggtgcggtgcgggtgcccaaggaaggggag
caacccaaccagcggcagaagttcaacccgctggtccgcctggacagcatcaacggcgga
tcggtcgaagacgccaagaagcggcccgagttcggcaaactgacgccgttgtaccccaac
cagcggcttcgtctggaaaccagtaccgagcggctgaccacccgggtcatcgacctcatc
atgccgatcggcaagggtcaacgcgcgttgattgtgtcgccgcccaaagcgggcaagaca
acgatcctgcaggacatcgccaacgcgatcaccaggaacaacccggaatgccacctcatg
gtcgtgctcgtcgacgagcggcctgaggaggtcaccgatatgcagcgctcggtcaaaggc
gaggtcatcgcttcaactttcgaccggccgccgtcggaccacacgtcggtcgccgagctg
gcgatcgaacgcgccaagcggctggtggagcaaggcaaggacgtcgtggtgctgctcgat
tcaatcacccggctaggccgcgcttacaacaacgcgtcgccggcgtcgggccggatcctg
tccggtggtgtcgattccacggcgttgtacccgcccaagcgcttcctgggggccgcgcgc
aacatcgaagagggcgggtcgctgaccatcatcgccactgcgatggtcgagaccgggtcc
actggtgacacggtcattttcgaggagttcaagggcaccggcaacgccgagctcaagctg
gaccgcaagatcgccgagcggcgggttttccctgcggtcgacgtgaacccttctggaacc
cgcaaggacgagctactgctgtcgcccgacgagttcgctattgtgcacaagctgcgccgc
gtgctatcgggcctggattcccaccaggccatcgacctgctgatgtcgcagctgcgtaag
acgaagaacaactacgaattccttgttcaggtgtccaagaccacgccagggtccatggac
agcgactga
DBGET
integrated database retrieval system
