Mycobacterium tuberculosis UT205: UDA_2783c
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Entry
UDA_2783c CDS
T02142
Symbol
gpsI
Name
(GenBank) gpsI
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mtd
Mycobacterium tuberculosis UT205
Pathway
mtd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mtd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UDA_2783c (gpsI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtd03019
]
UDA_2783c (gpsI)
03016 Transfer RNA biogenesis [BR:
mtd03016
]
UDA_2783c (gpsI)
Enzymes [BR:
mtd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
UDA_2783c (gpsI)
Messenger RNA biogenesis [BR:
mtd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
UDA_2783c (gpsI)
Transfer RNA biogenesis [BR:
mtd03016
]
Prokaryotic type
tRNA degradation factors
UDA_2783c (gpsI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
S1_RRP5
KH_5
Motif
Other DBs
NCBI-ProteinID:
CCE38244
LinkDB
All DBs
Position
complement(3095366..3097624)
Genome browser
AA seq
752 aa
AA seq
DB search
MSAAEIDEGVFETTATIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDDNMLLSATTASK
NPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR
NEIQIVVTILSLDPGDLYDVLAINAASASTQLGGLPFSGPIGGVRVALIDGTWVGFPTVD
QIERAVFDMVVAGRIVEGDVAIMMVEAEATENVVELVEGGAQAPTESVVAAGLEAAKPFI
AALCTAQQELADAAGKSGKPTVDFPVFPDYGEDVYYSVSSVATDELAAALTIGGKAERDQ
RIDEIKTQVVQRLADTYEGREKEVGAALRALTKKLVRQRILTDHFRIDGRGITDIRALSA
EVAVVPRAHGSALFERGETQILGVTTLDMIKMAQQIDSLGPETSKRYMHHYNFPPFSTGE
TGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTLA
LLNAGVPLKAPVAGIAMGLVSDDIQVEGAVDGVVERRFVTLTDILGAEDAFGDMDFKVAG
TKDFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDRPDEMSPYAPRVTTI
KVPVDKIGEVIGPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANP
QLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVNVGDKLRVE
IADIDKRGKISLILVADEDSTAAATDAATVTS
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgctgaaattgacgaaggcgtgttcgagacgaccgccaccatcgacaacggg
agctttggcacccggaccatccgcttcgagaccggccgattggccttgcaggccgccggc
gcggtggtcgcctacctcgacgacgacaacatgctgctgtcggcgaccaccgccagcaag
aaccccaaagaacacttcgacttcttccccctcacggtcgacgtcgaggagcgcatgtat
gcggccggccgcatccccggttcgttcttccgtcgcgagggccgaccctccaccgacgcg
atcctgacctgccggctcatcgaccgcccgctgcgcccgtcgtttgtcgacgggctgcgc
aacgagatccaaatcgtggtgacgattctcagcctggatccgggcgatctctacgacgta
ttggcgatcaacgcggcgtcggcgtccacccagctgggcggtctgccgttctccgggccc
atcggcggtgtgcgggtggcgctcatcgacggcacctgggtcggcttccccaccgtcgac
cagatcgagcgcgccgtgttcgacatggtcgtggccggccggatcgtcgagggtgatgtt
gccatcatgatggtcgaagccgaggccaccgaaaacgtcgtcgagctcgtcgaaggtggt
gcccaagcgccgacggaaagcgtggtggccgcgggcctggaggcggccaagccgtttatc
gccgcgctgtgcaccgcgcagcaggagcttgccgatgccgctggaaagtcgggcaaaccg
accgtcgacttcccggtgttccctgactacggcgaagacgtgtactactcggtgtcctcg
gtggccaccgacgagttggccgccgcgttgaccatcggcggtaaagccgagcgcgaccag
cgcatcgacgaaatcaagacccaggttgtgcagcggctcgccgacacctacgagggtcgc
gaaaaggaggtcggcgccgcgttgcgtgccctgaccaaaaagctggttcggcagcgcatc
ctcaccgaccatttccgtatcgacggccgcggcatcaccgacattcgcgcattgtcggcc
gaggtggccgtggttccgcgcgcgcacggcagcgcgctgttcgaacgcggcgaaacccag
atcctgggtgtgaccacactcgacatgatcaagatggcccagcagatcgactcgttgggg
ccggagacatcgaagcggtacatgcaccactacaacttcccgccgttctccaccggcgag
accggtcgggtcggttcgcccaagcggcgtgagatcgggcacggcgcactggccgagcgg
gccctggtgccggtgttgccgagcgtcgaggaattcccgtatgccattcgccaggtgtcg
gaggctctgggctccaacgggtcgacctcgatggggtcggtgtgcgcgtcgacgctggcg
ctgctcaacgccggggtgccgctcaaggcgccggtggccggcatcgcgatgggcctggtc
tccgacgacattcaagtagaaggggcggtcgacggcgttgtggagcgtcgcttcgtcacc
ctcaccgacatcctcggcgccgaagacgcgttcggtgacatggacttcaaggtcgccggg
accaaggacttcgtcaccgcgctgcagctggacaccaagctcgacgggatcccttcgcag
gtgcttgccggagcactcgagcaggccaaggacgcccgcctcacgatcttggaggtgatg
gctgaggccatcgatagacccgacgaaatgagtccctacgccccgcgggtgaccaccatc
aaggttccggtggacaagatcggggaggtcatcggacccaagggcaaggtcatcaacgcc
atcaccgaggagaccggcgcgcagatctccatcgaagacgacggcaccgtgttcgtcggc
gccaccgacgggccatcggcacaggccgcgatcgacaagatcaacgccatcgccaacccg
cagctgccgacggtgggcgaacggttcctcggaaccgtggtcaagaccaccgatttcggt
gcctttgtatcgttgctgcctggccgcgacggtctggtgcacatttccaaactcggcaag
ggcaagcgcatcgcgaaggtcgaggacgttgtcaatgtcggtgacaagctgcgggtggag
atcgccgacatcgacaaacggggcaagatctccctgatcctggtcgccgacgaggacagc
accgccgccgctaccgatgccgcgacggtcaccagctga
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