Mycobacterium tuberculosis CCDC5079: CCDC5079_0619
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Entry
CCDC5079_0619 CDS
T01991
Name
(GenBank) DNA-directed RNA polymerase subunit beta rpoB
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mte
Mycobacterium tuberculosis CCDC5079
Pathway
mte03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mte00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CCDC5079_0619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mte03021
]
CCDC5079_0619
03400 DNA repair and recombination proteins [BR:
mte03400
]
CCDC5079_0619
Enzymes [BR:
mte01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CCDC5079_0619
Transcription machinery [BR:
mte03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CCDC5079_0619
DNA repair and recombination proteins [BR:
mte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CCDC5079_0619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
Peptidase_M23
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
AEJ45809
LinkDB
All DBs
Position
758944..760896
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AA seq
650 aa
AA seq
DB search
MYLTADEEDRHVVAQANSPIDADGRFVEPRVLVRRKAGEVEYVPSSEVDYMDVSPRQMVS
VATAMIPFLEHDDANRALMGANMQRQAVPLVRSEAPLVGTGMELRAAIDAGDVVVAEESG
VIEEVSADYITVMHDNGTRRTYRMRKFARSNHGTCANQCPIVDAGDRVEAGQVIADGPCT
DDGEMALGKNLLVAIMPWEGHNYEDAIILSNRLVEEDVLTSIHIEEHEIDARDTKLGAEE
ITRDIPNISDEVLADLDERGIVRIGAEVRDGDILVGKVTPKGETELTPEERLLRAIFGEK
AREVRDTSLKVPHGESGKVIGIRVFSREDEDELPAGVNELVRVYVAQKRKISDGDKLAGR
HGNKGVIGKILPVEDMPFLADGTPVDIILNTHGVPRRMNIGQILETHLGWCAHSGWKVDA
AKGVPDWAARLPDELLEAQPNAIVSTPVFDGAQEAELQGLLSCTLPNRDGDVLVDADGKA
MLFDGRSGEPFPYPVTVGYMYIMKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRF
GEMECWAMQAYGAAYTLQELLTIKSDDTVGRVKVYEAIVKGENIPEPGIPESFKVLLKEL
QSLCLNVEVLSSDGAAIELREGEDEDLERAAANLGINLSRNESASVEDLA
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
gtgtacctgaccgccgacgaggaggaccgccacgtggtggcacaggccaattcgccgatc
gatgcggacggtcgcttcgtcgagccgcgcgtgctggtccgccgcaaggcgggcgaggtg
gagtacgtgccctcgtctgaggtggactacatggacgtctcgccccgccagatggtgtcg
gtggccaccgcgatgattcccttcctggagcacgacgacgccaaccgtgccctcatgggg
gcaaacatgcagcgccaggcggtgccgctggtccgtagcgaggccccgctggtgggcacc
gggatggagctgcgcgcggcgatcgacgccggcgacgtcgtcgtcgccgaagaaagcggc
gtcatcgaggaggtgtcggccgactacatcactgtgatgcacgacaacggcacccggcgt
acctaccggatgcgcaagtttgcccggtccaaccacggcacttgcgccaaccagtgcccc
atcgtggacgcgggcgaccgagtcgaggccggtcaggtgatcgccgacggtccctgtact
gacgacggcgagatggcgctgggcaagaacctgctggtggccatcatgccgtgggagggc
cacaactacgaggacgcgatcatcctgtccaaccgcctggtcgaagaggacgtgctcacc
tcgatccacatcgaggagcatgagatcgatgctcgcgacaccaagctgggtgcggaggag
atcacccgcgacatcccgaacatctccgacgaggtgctcgccgacctggatgagcggggc
atcgtgcgcatcggtgccgaggttcgcgacggggacatcctggtcggcaaggtcaccccg
aagggtgagaccgagctgacgccggaggagcggctgctgcgtgccatcttcggtgagaag
gcccgcgaggtgcgcgacacttcgctgaaggtgccgcacggcgaatccggcaaggtgatc
ggcattcgggtgttttcccgcgaggacgaggacgagttgccggccggtgtcaacgagctg
gtgcgtgtgtatgtggctcagaaacgcaagatctccgacggtgacaagctggccggccgg
cacggcaacaagggcgtgatcggcaagatcctgccggttgaggacatgccgttccttgcc
gacggcaccccggtggacattattttgaacacccacggcgtgccgcgacggatgaacatc
ggccagattttggagacccacctgggttggtgtgcccacagcggctggaaggtcgacgcc
gccaagggggttccggactgggccgccaggctgcccgacgaactgctcgaggcgcagccg
aacgccattgtgtcgacgccggtgttcgacggcgcccaggaggccgagctgcagggcctg
ttgtcgtgcacgctgcccaaccgcgacggtgacgtgctggtcgacgccgacggcaaggcc
atgctcttcgacgggcgcagcggcgagccgttcccgtacccggtcacggttggctacatg
tacatcatgaagctgcaccacctggtggacgacaagatccacgcccgctccaccgggccg
tactcgatgatcacccagcagccgctgggcggtaaggcgcagttcggtggccagcggttc
ggggagatggagtgctgggccatgcaggcctacggtgccgcctacaccctgcaggagctg
ttgaccatcaagtccgatgacaccgtcggccgcgtcaaggtgtacgaggcgatcgtcaag
ggtgagaacatcccggagccgggcatccccgagtcgttcaaggtgctgctcaaagaactg
cagtcgctgtgcctcaacgtcgaggtgctatcgagtgacggtgcggcgatcgaactgcgc
gaaggtgaggacgaggacctggagcgggccgcggccaacctgggaatcaatctgtcccgc
aacgaatccgcaagtgtcgaggatcttgcgtaa
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