Mycobacterium tuberculosis CCDC5079: CCDC5079_1509
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Entry
CCDC5079_1509 CDS
T01991
Name
(GenBank) excinuclease ABC subunit B uvrB
KO
K03702
excinuclease ABC subunit B
Organism
mte
Mycobacterium tuberculosis CCDC5079
Pathway
mte03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CCDC5079_1509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mte03400
]
CCDC5079_1509
DNA repair and recombination proteins [BR:
mte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CCDC5079_1509
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CCDC5079_1509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_22
AAA_16
AAA_5
DUF87
AAA_19
AAA_30
NAT10_TcmA_helicase
Orbi_NS3
AAA_7
AIG1
Motif
Other DBs
NCBI-ProteinID:
AEJ46699
LinkDB
All DBs
Position
1827050..1829209
Genome browser
AA seq
719 aa
AA seq
DB search
MAFATEHPVVAHSEYRAVEEIVRAGGHFEVVSPHAPAGDQPAAIDELERRINAGERDVVL
LGATGTGKSATTAWLIERLQRPTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQ
PEAYIAQTDTYIEKDSSINDDVERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDR
SVELKVGEEVPRDGLLRLLVDVQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFG
DEIEALYYLHPLTGEVIRQVDSLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQG
KLLEAQRLRMRTNYDIEMMRQVGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVID
ESHVTVPQIGGMYEGDISRKRNLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGP
YELSQTGGEFVEQVIRPTGLVDPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKM
AEDLTDYLLEMGIRVRYLHSEVDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLV
AILDADKEGFLRSSRSLIQTIGRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAY
NEANGIDPQPLRKKIADILDQVYREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVF
EGRDTSAMPRAELADLIKDLTAQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
gtggctttcgctaccgagcatccggtggtcgcgcattcggagtatcgcgcggtcgaggag
attgtgcgcgccggcggtcacttcgaggtggtcagtccgcatgctccggccggcgaccag
ccggccgcaatcgacgagctggagcggcggatcaacgcgggggagcgtgacgtggtgttg
ctcggcgccaccggcaccgggaagtcggcgaccaccgcgtggctgatcgaacgcctgcag
cggcccacactggtgatggcgcccaacaagacgttggccgcccagctggcgaacgaactg
cgagagatgttgccgcacaacgccgtcgagtacttcgtctcgtactacgactactaccag
ccggaggcgtatatcgcgcagaccgacacttatatcgaaaaggatagctccatcaacgac
gacgtggagcggctgcggcactccgcgacctcggcgctgctgtcgcgtcgtgacgtggtg
gtggtggcttcggtgtcctgcatctacggcctgggcacaccgcagtcctacctggaccgc
tccgtcgagctgaaggtgggcgaggaagtgccgcgcgatgggctgctgcggctgctggtc
gacgtgcaatacacccgaaacgacatgtcctttactcgcggctcgtttcgggtgcgcggc
gacaccgtcgagatcatcccctcctacgaagagctggcggttcgcatcgagttcttcggc
gacgagatcgaggcgctgtactatctgcacccgctgaccggcgaggttatccgccaggtc
gactcgctgcggatctttcccgctacccattacgtcgccggtccggagcggatggcgcat
gccgtctcggccatcgaggaagaactcgccgagcgactcgccgagcttgagagccagggc
aagctgctggaggcgcagcggctgcggatgcgcaccaactacgacatcgaaatgatgcgg
caggtcgggttctgctcgggcatcgagaactactcccgccacatcgacggtagggggccc
ggcacgccgcccgcgaccctgctcgactatttccccgaggatttcctgctcgttatcgac
gagtcacatgtcaccgtgccgcagatcggcggcatgtacgagggcgacatctcccgcaag
cgcaacctggtggagtacggtttccggctgccgtcggcgtgcgacaaccgtccgctgacc
tgggaggagttcgctgaccggatcgggcagacggtgtatctgtctgccaccccggggccc
tacgagctcagccagaccggcggcgagttcgtcgagcaggtgatccggccgaccggtctg
gtggacccgaaagtggtagtcaagccgaccaaagggcagatcgacgacctgatcggcgag
atccgcacacgggcagacgccgaccagcgggtgctggtgacgacgctgaccaagaagatg
gccgaagacctcaccgactacctgctggagatgggcattcgggtgcgctacctgcattcg
gaggtcgacacgttgcgccgggtcgagttgttgcgccagctgcgtctgggtgactacgac
gtgctggtcggcatcaacctgctccgcgagggcctagacctgcccgaggtgtcgctggtg
gcgatcctcgacgccgacaaagaaggattcctgcggtcaagccgcagcctgatccagacc
atcggacgcgccgctcgcaacgtgtccggcgaggtgcacatgtacgccgacaaaatcacc
gactcgatgagggaagccatcgacgagaccgaacgccggcgggccaagcagatcgcctac
aacgaggccaacggaatcgacccacagccgctgcgcaaaaagatcgccgacatcctcgat
caggtctatcgggaggccgacgacaccgccgtcgtcgaggtcggcggatccgggcgcaac
gcatcccgcggccggcgggctcagggtgagcccggccgggcggtcagcgccggcgtgttc
gagggccgcgacacctccgccatgccgcgcgctgagctggccgacctaatcaaagacctc
accgcacagatgatggcggccgcgcgcgacctgcagttcgagctggcggcccggttccgc
gacgagatcgccgacctcaagcgggagctgcgggggatggacgcggccggcctgaagtga
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