Mycobacterium tuberculosis CCDC5079: CCDC5079_2464
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Entry
CCDC5079_2464 CDS
T01991
Name
(GenBank) hypothetical protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mte
Mycobacterium tuberculosis CCDC5079
Brite
KEGG Orthology (KO) [BR:
mte00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mte03016
]
CCDC5079_2464
Enzymes [BR:
mte01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CCDC5079_2464
Transfer RNA biogenesis [BR:
mte03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CCDC5079_2464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
DUF7696
Motif
Other DBs
NCBI-ProteinID:
AEJ47654
LinkDB
All DBs
Position
2977540..2978754
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AA seq
404 aa
AA seq
DB search
MTVGEIAAAAELLDRGRGPFAVDAERASGFRYSGRAYLIQIRRAEAGTVLIDPVSHGGDP
LTVLAPVAEVLSTNEWILHSADQDLPCLAEVGMRPPALYDTELAGRLAGFDRVNLAAMVE
RLLGLGLTKGHGAADWSKRPLPSAWLNYAALDVELLIELRAAISRVLAEQGKTDWAAQEF
EHLRSFESRPPPAAARQDRWRRTSGIHKVHDRRGLAAVRELWTARDRIAQRRDIAPRRIL
PDSAIIDAAIADPKSVDDLVALPVFGGRNQRRSAAVWWAALAAARESPDPPEIAEPANGP
PPPGRWVRRKPAAAARLDAARAALTEVSQRVRVPTENLVSPDLVRRLCWEWEDISQSSPD
PIAAVEAYLRTGQARAWQLELVVPILTAALTGAPDAGAQGDDGS
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtcggtgaaatcgccgctgccgcagaactactggaccgcgggcgcggaccgttc
gcggtagacgccgagcgggcgtcgggtttccgctactccggccgcgcctacctgattcag
atccggcgggccgaggccggcaccgtactgatcgacccggtcagccacggcggtgacccg
ttgaccgtgctggcgccggtcgccgaggtgctcagcaccaacgagtggatcctgcactcc
gccgatcaggatctgccctgtctcgccgaggtcggtatgcgaccgccagcgctatacgac
accgagcttgccgggcgcctggccgggttcgatcgagtgaacctggcggccatggtcgag
cggttacttggactgggattgaccaagggccacggcgcggccgactggtccaagcgcccg
ctaccctcggcctggctgaactacgcggcgttggacgtggaactgctcatcgaactacgc
gcggcgatctcgcgggtgctggccgagcaaggcaaaaccgattgggctgcgcaggaattc
gagcacctgcggtcgttcgaatcaaggccacccccagcggccgcccggcaggaccgctgg
cgacgaacctcgggtatccacaaagtgcatgaccggcgggggctggccgcggtccgcgaa
ttgtggacagcgcgtgaccgaatcgcccagcgccgcgacatcgcgccccgccggatcttg
ccggactcggccattatcgatgccgccatcgccgacccaaagtcagtcgacgaccttgtc
gcgttaccggtgttcggcggacgcaaccaacgtcgcagcgcggctgtgtggtgggcggca
ctggcagccgcacgcgaaagcccagatccgccggagatcgccgaaccggcaaacgggccg
ccgccgccggggcggtgggtcagacggaaaccggcagccgccgcacggctggatgcggcg
cgcgcggcgctgacggaggtgtcgcaacgggtgcgggtaccgaccgagaacctggtctca
cctgatctggtgcgacggctgtgttgggaatgggaggacatctcgcagagttctccagac
ccgattgccgctgtcgaggcgtacctgcgcaccggccaggcacgggcctggcagctcgaa
ctagtggtccccatcctgaccgcggcgttgacaggggctccggacgccggcgcccagggc
gatgatggctcttag
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