Mycobacterium tuberculosis CCDC5079: CCDC5079_2684
Help
Entry
CCDC5079_2684 CDS
T01991
Name
(GenBank) formamidopyrimidine-DNA glycosylase fpg
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mte
Mycobacterium tuberculosis CCDC5079
Pathway
mte03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CCDC5079_2684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mte03400
]
CCDC5079_2684
Enzymes [BR:
mte01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CCDC5079_2684
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CCDC5079_2684
DNA repair and recombination proteins [BR:
mte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CCDC5079_2684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
TackOD1
DUF7573
DUF5830
Auto_anti-p27
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AEJ47874
LinkDB
All DBs
Position
complement(3213542..3214462)
Genome browser
AA seq
306 aa
AA seq
DB search
MVMTRCARLRRACDHHWMPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPAD
LTARLRGARINGTDRRGKYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAVPCAAHVRI
SALLDDGTVLSFADQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLR
RKHSELKRQLLDQRVVSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMRE
ALAKGGTSFDSLYVNVNGESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRC
QPRPRK
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggtgatgacccgctgcgcccggcttcgccgcgcttgcgatcatcactggatgcccgag
ctgcccgaagtcgaggtggtgcggcgcggcttgcaggctcacgtgaccggccggaccatc
accgaggttcgggtgcaccacccccgcgctgtgcgccgccacgatgccgggcccgcggat
ctgacggcgcggctgcggggagcgcggatcaacggaaccgatcggcgcggcaagtacctg
tggttgacactcaatacggctggggtccataggccgacggacaccgcactcgtggtgcac
ctgggcatgagtgggcagatgctgctcggggcggtgccgtgtgccgctcacgtccggatt
tccgcgctgctcgacgacgggaccgtgctgagcttcgctgaccaacggaccttcggaggg
tggctgcttgccgacctggtgacggtggacggcagcgtggtaccggtgccggtcgcccac
ctggcgcgcgacccgcttgacccgcggttcgattgtgacgctgtagttaaagtgttgcgg
cgcaagcattccgaactcaagcgccagctgctggatcagcgggtggtgtcgggaatcggc
aacatctatgccgatgaggcgctgtggcgggccaaggtgaacggcgcccacgtcgccgcc
acactaaggtgccggcgtctgggagcggtcctgcatgccgccgccgacgtgatgcgcgaa
gcgctggcgaaaggtggcacctcgttcgactctttgtatgtcaacgtcaacggcgagtcg
ggctacttcgagcggtcgctggacgcttatggccgcgaaggcgaaaactgtcggcgctgc
ggcgcggtgatacgccgggagaggtttatgaaccgctcgtcgttctactgcccgcgatgc
cagccgcggccccgaaagtag
DBGET
integrated database retrieval system
