Mycobacterium tuberculosis CCDC5079: CCDC5079_2949
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Entry
CCDC5079_2949 CDS
T01991
Name
(GenBank) ATP-dependent DNA helicase II uvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mte
Mycobacterium tuberculosis CCDC5079
Pathway
mte03420
Nucleotide excision repair
mte03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CCDC5079_2949
03430 Mismatch repair
CCDC5079_2949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mte03400
]
CCDC5079_2949
Enzymes [BR:
mte01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CCDC5079_2949
DNA repair and recombination proteins [BR:
mte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CCDC5079_2949
MMR (mismatch excision repair)
Other MMR factors
CCDC5079_2949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AEJ48139
LinkDB
All DBs
Position
complement(3547584..3549773)
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AA seq
729 aa
AA seq
DB search
MAARQLFMSHAPRRGDTPGLSSTAAKMDVMSIASDPLIAGLDDQQREAVLAPRGPVCVLA
GAGTGKTRTITHRIASLVASGHVAAGQVLAVTFTQRAAGEMRSRLRALDAAARTGSGVGA
VQALTFHAAAYRQLRYFWSRVIADTGWQLLDSKFAVVARAASRTRLHASTDDVRDLAGEI
EWAKASLIGPEEYVTAVAAARRDPPLDAAQIAAVYSEYEALKARGDGVTLLDFDDLLLHT
AAAIENDAAVAEEFQDRYRCFVVDEYQDVTPLQQRVLSAWLGDRDDLTVVGDANQTIYSF
TGASPRFLLDFSRRFPDAAVVRLERDYRSTPQVVSLANRVIAAARGRVAGSKLRLSGQRE
PGPVPSFHEHSDEPAEAATVAASIARLIASGTPPSEVAILYRVNAQSEVYEEALTQAGIA
YQVRGGEGFFNRQEIKQALLALQRVSERDTDAALSDVVRAVLAPLGLTAQPPVGTRARER
WEALTALAELVDDELAQRPALQLPGLLAELRRRAEARHPPVVQGVTLASLHAAKGLEWDA
VFLVGLADGTLPISHALAHGPNSEPVEEERRLLYVGITRARVHLALSWALSRSPGGRQSR
KPSRFLNGIAPQTRADPVPGTSRRNRGAAARCRICNNELNTSAAVMLRRCETCAADVDEE
LLLQLKSWRLSTAKEQNVPAYVVFTDNTLIAIAELLPTDDAALIAIPGIGARKLEQYGSD
VLQLVRGRT
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
gtggcggctcggcagttgttcatgtcgcacgccccacggcgtggcgacacgcccggtctg
tcatctaccgctgccaagatggacgtcatgtcgatagccagcgacccattgattgccggg
ctggacgaccagcagcgcgaagccgtactggctccgcgtggaccggtgtgcgtgctggcc
ggtgccggaaccggcaagacccgcaccatcactcaccggatcgcttcgctggtcgcgagc
ggtcacgtcgccgccgggcaggtgctggctgtgacattcacccagcgcgcggcgggcgaa
atgcgcagccggttgcgcgcactcgacgccgcggcacggaccggttcgggcgtcggcgct
gtgcaggcgctgacctttcacgcggccgcgtatcgccagctgcggtacttctggtcgcgc
gtaatcgctgacaccggctggcagctgctggacagcaagttcgccgtggtggcccgcgcc
gccagccgcaccaggctgcacgccagcaccgatgatgtgcgtgacctggccggcgagatc
gagtgggccaaggcgtccctgatcggccccgaggagtatgtgaccgcagtggcggccgca
cgccgagaccccccgttggacgccgcgcaaatcgcggctgtctactccgaatacgaggcg
ctcaaggcccgcggcgacggcgtcaccttacttgacttcgacgacctgttgctgcacacc
gcggccgcgattgaaaacgacgccgcggtggccgaggagttccaggaccggtaccggtgt
ttcgtcgtggacgagtaccaggacgtcacccccctgcagcagcgggtgctctcggcctgg
ttgggtgatcgggacgacctgaccgtcgtcggcgacgccaaccagaccatctactcgttt
accggggcttcgcctcgtttcctactcgacttctcgcggcggttcccggacgccgcggtg
gtgcggctggagcgtgattaccggtcaactccgcaggtggtgtcattggctaaccgggtg
atcgccgccgcccggggccgtgttgccggcagcaagctacggttgtccggccagcgtgag
ccgggtccggtcccgtcgttccatgagcattccgacgagcccgccgaggctgccacggtg
gcggcgtcaatcgcccggttaatcgcatcgggcactccgccatccgaggtagccattctc
taccgagtcaatgcgcagtcagaggtttatgaagaggcgttgacccaggcgggtatcgcc
tatcaggttcgcggtggcgaggggtttttcaaccgtcaggaaatcaagcaggcgttgctt
gccttacagcgtgtgtccgaacgtgataccgatgccgcgttgtccgacgtggttcgcgcg
gtgctcgcaccactggggctgacggcacaaccgccggtcggcacccgcgccagggaacgc
tgggaagcgctcaccgcgctggccgagctggtcgacgacgagctggcgcagcgtcccgca
ctgcagctgccaggcctgcttgccgagctacgccggcgggcggaggcgcggcacccaccg
gtggtgcagggcgtcacgctggcctcactgcacgccgccaagggactggaatgggacgcg
gtgttcctggtcggattggctgacggcacgctgcccatctcacatgcgctggcacacggc
cccaatagcgagcccgtagaggaagagcgtcggctgctctacgtcggaatcacacgggcc
cgagtccatttggcgctcagctgggcgctatcacggtccccgggcgggcgccagagccgc
aagccctcgcggttcctcaacggcattgcgccgcagacgcgcgccgatccggtgccgggc
acatcccgacgcaaccggggcgccgcagcgcgctgccggatctgtaacaacgagctgaac
acttcggcggccgtcatgctgcggcggtgtgagacgtgtgcagccgacgtcgacgaggag
ttgttgttgcagctcaagtcctggcgtctgagcaccgccaaggaacagaacgtccccgcc
tatgtcgttttcaccgacaacaccctgatcgcgatcgccgagctgctacctaccgacgac
gcggcgctgatcgcgatccccggcatcggtgcccgcaagctggaacaatacggatcggac
gtgctgcagctggttcgcggtcggacctga
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