Methylobacterium terrae: DK419_17155
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Entry
DK419_17155 CDS
T06384
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
mtea
Methylobacterium terrae
Pathway
mtea03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mtea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DK419_17155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtea03400
]
DK419_17155
DNA repair and recombination proteins [BR:
mtea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DK419_17155
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DK419_17155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
RsgA_GTPase
AAA_16
AAA_25
nSTAND1
DnaJ_CXXCXGXG
AAA_21
Motif
Other DBs
NCBI-ProteinID:
AWN47834
UniProt:
A0A2U8WNJ8
LinkDB
All DBs
Position
3729174..3732158
Genome browser
AA seq
994 aa
AA seq
DB search
MASLDKLFDRSAEARVIAVRGAREHNLKNVDLTIPRDKLVVFTGLSGSGKSSLAFDTIYA
EGQRRYVESLSAYARQFLEMMAKPDVDQIDGLSPAISIEQKTTSKNPRSTVGTVTEIYDY
MRLLWARVGIPYSPATGLPIESQTVSQMVDRVLALPEKTRLYLLAPVVRGRKGEYRKEIA
EFQKKGFQRLRIDGEYYAIDDVPKLDKKLKHDIDVVVDRIVVRADMASRLADSFETALEL
ADGIAVVTFADASEEGSGPEPITFSSRFACPVSGFTIPEIEPRLFSFNNPFGACPTCGGI
GHEMRIDPTLVIADESFSLSRGAVAPWAKSTSPYYGQTLEALARHYRFRTDTPWGKLTAA
ARQVVLYGSDGDEVRFAYNDGLRAYEVSKPFEGVIPNLERRYKETDSDAAREEIGRFMGE
TPCSACAGKRLKPEALAVKIAGSDIGDATVLSVRDAHRWFGELPGHLSAKHNEIAARILK
EIRDRLTFLVDVGLEYLTLARGSGSLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQ
RDNERLLGTLKRLRDLGNSVIVVEHDEDAILQADYVVDVGPGAGIHGGRIVAQGTPPELL
ADPNSLTAKYLTGALAVRVPKMRRKAKKNPAAKAGEPEPQTLRLVGARGNNLKDVTAEIP
LGTFTCITGVSGGGKSTLVVDTLYKAVARKLNGALEHPAPHDRIEGLEHLDKVIDIDQSP
IGRTPRSNPATYIGAFTPIRDWFAGLPEAKARGYQPGRFSFNVKGGRCEACSGDGVIKIE
MHFLPDVYVTCDVCKGKRYDRETLEVKYRERSIADVLDMTVEEAAELFKAVPAIREKLET
LARVGLGYVRVGQQATTLSGGEAQRVKLSKELSKRATGRTLYILDEPTTGLHFHDVAKLM
EVLHELVDQGNSVVVIEHNLEVIKTADWVIDMGPEGGDGGGIIVAQGTPEDIAASDKSHT
GRFLREVLARRPAARPAPRPARSRKAATSKQAAE
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atggcctctctcgacaagctcttcgaccgttccgcggaagcgcgcgtgatcgcggtgcgg
ggtgcccgcgagcacaacctgaagaacgtcgacctgacgatcccgcgcgacaagctcgtg
gtgttcaccgggctgtcgggctccggcaagtcgtcgctcgccttcgacaccatctacgcg
gaagggcagcgccgctacgtcgagtcgctctcggcctatgcgcgccagttcctcgagatg
atggcgaagcccgacgtcgaccagatcgacgggctgtcgccggcgatctcgatcgagcag
aagacgacgtcgaagaacccgcgctcgacggtcggcaccgtcacggagatctacgactac
atgcgcctgctgtgggcgcgggtcggcatcccgtactccccggccaccggcctgccgatc
gagagccagaccgtcagccagatggtcgaccgggtgctggccctgccggagaagacccgg
ctctacctgctcgcccccgtggtgcgcggccgcaagggcgagtaccgcaaggagatcgcc
gagttccagaagaagggcttccagcgcctgcgcatcgacggcgagtactacgccatcgac
gacgtgccgaagctcgacaagaagctcaagcacgacatcgacgtggtggtcgaccggatc
gtggtgcgggccgacatggcctcgcggctcgccgattcgttcgagaccgcgctggagctc
gccgacggcatcgcggtcgtgaccttcgcggacgcgtccgaggagggctcaggccccgaa
cccatcaccttctcgtcgcgcttcgcctgcccggtctccggcttcacgattcccgagatc
gagcccagactcttttccttcaacaaccccttcggcgcctgcccgacctgcggcggcatt
ggccacgagatgcggatcgatccgacgctcgtcatcgccgacgagtccttcagcctgtcg
cgcggcgccgtcgcgccctgggcgaaatcgacctcgccctattacggccagaccctggag
gcgctggcgcgccactaccgcttccgcaccgacacgccgtggggcaagctcaccgcggcc
gcccgccaggtcgtgctctacggctcggacggcgacgaggtccgcttcgcctacaacgac
ggcttgcgcgcctacgaggtctcgaagccgttcgagggcgtgatcccgaacctcgagcgg
cgctacaaggagaccgacagcgacgcggcccgggaggagatcggccgattcatgggcgag
acgccgtgctcggcctgcgccggcaagcggctgaagcccgaggcgctggcggtgaagatc
gccggctccgacatcggcgacgccaccgtgctctccgtgcgcgacgcccaccgctggttc
ggcgagttgcccgggcatctctcagctaagcacaacgagatcgcggcccgcatcctcaag
gagatccgcgaccgcctgaccttcctggtcgatgtcggcctcgaatacctgacgctcgcc
cgcggctcgggctcgctgtcgggcggcgagagccagcgcatccgcctcgcctcgcagatc
ggctcggggctgaccggcgtgctctacgtcctcgacgaaccctcgatcggcctgcaccag
cgcgacaacgagcgcctgctcggcacgctgaagcgcctgcgcgacctcggcaactcggtg
atcgtcgtcgagcacgacgaggacgcgatcctccaggccgactacgtcgtcgatgtcggc
cccggtgccggcatccatggcgggcggatcgtggcgcaaggcacgccgcccgagctcctg
gccgatccgaactcgctgacggcgaagtacctcaccggcgccctcgcggtgcgggtgccg
aagatgcgccggaaggcgaagaagaaccccgccgccaaggccggcgagcccgagccgcag
accctgcgcctcgtcggcgcgcggggcaacaacctgaaggacgtgaccgccgagatcccg
ctcggcaccttcacctgcatcaccggggtgtccggcggcggcaagtcgacgctggtcgtc
gacacgctctacaaggcggtggcgcgcaagctcaacggcgcgctcgagcatcccgcgccc
cacgaccgcatcgaggggctggagcacctcgacaaggtcatcgacatcgaccagtcgccg
atcggccgcaccccgcgctcgaaccccgcgacctatatcggcgctttcacgccgatccgc
gactggttcgccggcctgcccgaggccaaggcccgcggttaccagccggggcggttctcg
ttcaacgtcaagggcgggcgctgcgaggcctgctcgggcgacggcgtgatcaagatcgag
atgcacttcctgcccgacgtctacgtcacctgcgacgtctgcaagggcaagcgctacgac
cgcgagaccctggaggtgaagtaccgcgagcgctcgatcgccgacgtcctcgacatgacg
gtggaggaggcggccgagctgttcaaggcggtgccggcgatccgcgagaagctcgagacc
ctggcccgggtcggcctcggctacgtccgggtcggccagcaggccacgaccctgtcgggc
ggcgaggcgcagcgcgtgaagctgtcgaaggaactctcgaagcgcgccaccggccgcacg
ctctacatcctcgacgagccgaccaccggcctgcacttccacgacgtcgccaagctgatg
gaggtgctgcacgagctggtcgaccagggcaacagcgtcgtggtgatcgagcacaacctc
gaggtcatcaagaccgccgactgggtgatcgacatggggccggagggcggcgacggcggc
ggcatcatcgtggcgcagggcacgccggaggacatcgccgcgtcggacaagagccatacc
ggccggttcctgcgcgaggtcctggcccgccgccccgcggcccggccggcgccccgcccg
gcccggagccgcaaggcagcaaccagcaagcaggcggccgagtaa
DBGET
integrated database retrieval system