Microbacterium terricola: OAU46_04370
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Entry
OAU46_04370 CDS
T08704
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mtec
Microbacterium terricola
Brite
KEGG Orthology (KO) [BR:
mtec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mtec03032
]
OAU46_04370 (topA)
03400 DNA repair and recombination proteins [BR:
mtec03400
]
OAU46_04370 (topA)
Enzymes [BR:
mtec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
OAU46_04370 (topA)
DNA replication proteins [BR:
mtec03032
]
Prokaryotic type
DNA Topoisomerases
OAU46_04370 (topA)
DNA repair and recombination proteins [BR:
mtec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OAU46_04370 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
UYK40889
LinkDB
All DBs
Position
893214..895940
Genome browser
AA seq
908 aa
AA seq
DB search
MATGKKLVIVESPTKMKSIQGYLGDGYVVKSSVGHIRDLASKKDIPADKKAAYGKYSIDI
DNDFDPLYVPSDRGKKTVTELKQALKGVDELLLATDEDREGEAIAWHLLEALKPKVPVKR
MVFHEITKDAIQAAVGNTRELDTALVDAQETRRILDRLYGWDVSPVLWRKIGSGSEGQAL
SAGRVQSAATRLVVDRERERMAFVSAGYWDIETHAVKDAASFTARLARLDGAGLARGTDF
DDKGQLKKAVVVLDEETARTLAAAIEAVATASVIALEAKPGTRSPKPPFTTSTLQQEAGR
KLSMSAKHAMSVAQSLYEQGYITYMRTDSVALSAQAIRAAREQAVALYGDKAVPANPRAY
KGKSKNAQEAHEAIRPSGEEFRTPSQVSGSLNRDELRLYEMIWMRTIASQMSDAKYETTT
VTLEVAAAERRAEFTASGTVYTFKGFLEAYEEGRDEKRSDADKADDQALPSMAVGDTLRL
RDVEPKGHSTSPKPRYTEASLVKALEEKGIGRPSTFASIIDVILNRGYVTKRGQALVPSW
LAFSVVRLLEEHFADLVDYDFTAALEDDLDAIARGEQERSAWLRDFYFGSDAHAGLRNIV
DNLGDIDARELNATRITDSATLRFGKYGPYLDIVDPANPDAEPRRVNIPDDLAPDELTAE
KTQELIDAPVAGDRVLGENPENGKLIVVKDGRYGPYVQEVEATEAEEVDEATGEVRQAPE
AVEAPKKRGAKKDAAPKPRTASLFKSMSVDTIDLDTALQLLSLPRTLGADPESGEEITAQ
NGRYGPYLKKGTDSRSLDTEQQLFDITLAEALERYAQPKYGARRASSALKEFDADPVSGK
PIRVRDGRFGPYVTDGETNVTIPRGQSVDDITFERAVEMIAEKRAKGPAPKRATTRKPAA
RKPAAKKK
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
ttggcaacaggcaagaagctcgtcatcgtcgagtcaccgacgaagatgaagtcgatccag
ggctacctcggcgacggatatgtcgtgaagagctcggtcggtcacatccgtgacctggcc
agcaagaaggacatcccggccgacaagaaggccgcgtacggcaagtactcgatcgacatc
gacaacgacttcgaccccctgtacgtccccagcgaccgcggcaagaagacggtcaccgag
ctcaagcaggcgctgaagggagtcgacgagctcctcctcgcgaccgatgaggaccgcgag
ggcgaagccatcgcgtggcacctgctcgaagcgctcaagccgaaggtccccgtcaagcgg
atggtcttccacgagatcaccaaggacgccatccaggcggccgtcggcaacacccgcgag
ctcgacacggcgctcgtcgacgcgcaggagacccgccgcatcctcgaccgtctgtacggg
tgggacgtctcgcccgtgctgtggcgcaagatcggcagcggctcggaggggcaggcgctg
agcgccggccgcgtgcagtccgccgcgacccgcctggtcgtcgaccgcgagcgcgagcgt
atggcgttcgtgagcgcgggctactgggacatcgagacgcacgccgtgaaggacgccgcg
tcgttcaccgcgcgactcgcccgtctcgacggcgctggcctcgcccgcggcaccgacttc
gacgacaagggccagctcaagaaggccgtcgtcgtgctcgacgaggagaccgcgcgcacc
ctggccgccgccatcgaggctgtggcgacggcatccgtcatcgccctcgaggcgaagccg
ggcacccgcagccccaagccgccgttcaccacctcgacgctgcagcaggaggccggccgc
aagctctcgatgagcgcgaagcacgcgatgagcgtcgcgcagagcctgtacgagcagggc
tacatcacctatatgcgcaccgactcggtcgcgctgagcgcccaggcgatccgggccgcg
cgcgagcaggcggtcgcgctctacggagacaaggccgttccggccaacccgcgcgcgtac
aagggcaagagcaagaacgcgcaggaggcgcacgaggcgatccgcccgtcgggcgaggag
ttccgcacgccgtcgcaggtgtccggttcgctcaaccgcgacgagctgcgcctgtacgag
atgatctggatgcgcacgatcgccagccagatgtccgacgcgaagtacgagaccaccacc
gtcacgctcgaggtcgccgctgcggagcgccgcgccgagttcaccgcgtcgggcaccgtg
tacaccttcaagggcttcctcgaggcgtacgaggaaggccgcgacgagaagcgcagcgac
gccgacaaggccgacgaccaggcgctgccgagcatggcggtcggcgacacgctgcgtctg
cgcgacgtggagccgaagggccacagcacgagcccgaagccccgctacaccgaggcctcg
ctcgtcaaggcgctcgaggagaagggcatcgggcgcccgtcgacgttcgccagcatcatc
gacgtgatcctgaaccgcggctacgtcaccaaacgtggccaggccctggtgccgagctgg
ctcgcgttcagtgtcgtgcgcctgctcgaagagcacttcgccgacctcgtcgactacgac
ttcacggcggcactcgaggacgacctcgacgccatcgcccgcggcgagcaggagcgcagc
gcctggctgcgcgacttctacttcggctccgacgcgcacgcggggctgcgcaacatcgtc
gacaacctcggcgacatcgacgcgcgcgagctgaacgccacccggatcaccgattcggcc
actctgcgcttcggcaagtacggcccgtacctcgacatcgtcgacccggcgaatccggac
gccgagccgcgccgagtgaacatccccgacgacctggctccggacgagctcacggccgag
aagacccaggagctcatcgacgctcccgtcgccggcgaccgcgtcctcggcgagaacccc
gagaacggcaagctcatcgtcgtcaaggacggtcgctacgggccctacgtccaggaggtc
gaggccaccgaggcggaggaggtcgacgaggccaccggcgaggtgcgacaggctccggaa
gcggtcgaagcgccgaagaagcgcggcgcgaagaaggatgctgcgccgaaaccccggacc
gcctcgctgttcaagagcatgtcggtcgacacgatcgacctcgacacggccctccagctg
ctctcgctgccgcggaccctcggagccgaccccgagtcgggcgaggagatcacggcgcag
aacggccgctacggtccgtacctgaagaagggcacggattcgcggtcgctcgacaccgag
cagcagctgttcgacatcacgctcgccgaggccctcgaacggtacgcgcagcccaagtac
ggcgcccgccgcgcatcgagcgccctgaaggagttcgacgccgacccggtcagcggcaag
cccatccgcgtccgcgacggccggttcggcccgtacgtcaccgacggcgagacgaacgtc
acgatcccgcgcggtcagagcgtcgacgacatcacgttcgagcgggcggtcgagatgatc
gccgagaagcgcgcgaagggacccgcgcccaagcgcgccacgacccgcaagccggccgcg
cgcaagccggcggccaagaagaagtga
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