Microbacterium terricola: OAU46_06880
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Entry
OAU46_06880 CDS
T08704
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
mtec
Microbacterium terricola
Pathway
mtec03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mtec00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
OAU46_06880 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtec03019
]
OAU46_06880 (rnc)
03009 Ribosome biogenesis [BR:
mtec03009
]
OAU46_06880 (rnc)
03036 Chromosome and associated proteins [BR:
mtec03036
]
OAU46_06880 (rnc)
Enzymes [BR:
mtec01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
OAU46_06880 (rnc)
Messenger RNA biogenesis [BR:
mtec03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
OAU46_06880 (rnc)
Ribosome biogenesis [BR:
mtec03009
]
Eukaryotic type
90S particles
RNase
OAU46_06880 (rnc)
Prokaryotic type
rRNA processing factors
OAU46_06880 (rnc)
Chromosome and associated proteins [BR:
mtec03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
OAU46_06880 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
UYK41348
LinkDB
All DBs
Position
1422252..1422923
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AA seq
223 aa
AA seq
DB search
MDSLTEKLGVDIDPELLSLALTHRSYAYENGQTPHNERLEFLGDSVLGQAVTVRLFTVHP
DLDEGELAKRRAAVVSTIALAEVARGIGLGEHVRLGRGEELTGGRDKDSILADTMEAVFG
ATFLSAGPAAATALVLRLIQPLLDDPERYGAAMDPKTALQETAARLGATPPVYEVTATGP
DHERLFEAEVTVAGSTGRGTGTSKKHAEMAAALAAWRALSGRA
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
ttggacagtctcaccgagaagctcggggtcgatatcgaccccgagcttctgtcgcttgca
ctgacgcaccgctcgtacgcgtacgagaacggccagaccccgcacaacgagcgcctcgag
ttcctcggcgactcggttctcggccaggccgtcacggtgcggctgttcaccgtgcacccc
gacctcgacgagggcgagctcgccaagcggcgcgcggccgtggtgtccacgatcgcactc
gctgaggtggcgcgcggcatcgggctcggcgagcacgtccggctcggccgcggtgaagag
ctcaccggaggccgcgacaaggactcgatcctcgccgacaccatggaggccgtcttcggc
gcgaccttcctctcggccggcccggccgccgcgaccgcgctcgtgctgcggctgatccag
ccgctgctggacgacccagagcgctatggtgcggccatggacccgaagaccgcgcttcag
gagaccgcagcgcgcctaggcgcgacgccccctgtctacgaggtgaccgccacgggcccg
gatcacgagcggctcttcgaggcggaggtgaccgtcgccggttcgaccgggcgtggcacg
ggcaccagcaagaagcatgcggagatggccgccgccctggccgcctggcgcgcgctcagc
ggtcgtgcctga
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