Microbacterium terricola: OAU46_13930
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Entry
OAU46_13930 CDS
T08704
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mtec
Microbacterium terricola
Brite
KEGG Orthology (KO) [BR:
mtec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mtec03032
]
OAU46_13930
03400 DNA repair and recombination proteins [BR:
mtec03400
]
OAU46_13930
Enzymes [BR:
mtec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
OAU46_13930
DNA replication proteins [BR:
mtec03032
]
Prokaryotic type
DNA Topoisomerases
OAU46_13930
DNA repair and recombination proteins [BR:
mtec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OAU46_13930
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Top1B_N_bact
Topoisom_I
Motif
Other DBs
NCBI-ProteinID:
UYK39775
LinkDB
All DBs
Position
complement(2928167..2929132)
Genome browser
AA seq
321 aa
AA seq
DB search
MVRLRRVHPDSDPGFRRVRAGAGFRYVDADGDGAGEDDRERIRALVIPPAWEDVWISAAA
NGHIQAVGTDEAGRRQYLYHPDWRARRDSGKFGRSLALAAALPHARGRVTTALHRERLDR
EHVLGAAFRMLDSAAPRIGSARYLERHGSRGLTTLQRRDARVNGQEITLSFPAKSGRRAF
IEIDDADLAATIEQLSAGRPRSRLLAYESGRRRVPLTPADVNAYVRSLTGGTFTAKDFRT
LRGTILAAEALARIGTVDTKSDRKRAEQLAVRATADALGNTVAVARGSYIDPRVFALYGR
GKLLDLGVSPESAIRSLIQGP
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
gtggtgcgcctgcgccgggtgcacccggactccgaccccggcttccggcgcgtgcgcgcc
ggcgccggtttccgctacgtcgacgccgacggcgacggtgcgggagaagacgaccgtgag
cggatccgggcgctcgtgatcccaccggcctgggaggacgtctggatctccgctgcggcc
aacgggcacatccaggccgtcgggacggacgaggccgggcgccgtcagtacctctatcac
cctgactggcgcgcgcgccgcgactcgggcaagttcggacggtcgctcgcgctcgccgcc
gcgctgccgcacgcgcggggacgcgtcaccaccgcgctgcaccgggagcggctcgatcga
gagcatgtgctcggcgccgcgttccggatgctcgactccgccgcgccgcgcatcgggtcc
gcccggtacctcgagcggcacggcagccgcggcctgaccaccctccagcgccgcgatgcg
cgggtgaacggccaggagatcacgctctcgttccctgccaagagcgggcgtcgcgccttc
atcgagatcgacgacgcggatctggctgccaccatcgagcagctgtccgccggtcgcccg
cgttcacggctgctggcgtacgagagcggacggcggcgggtcccactcacgcccgccgac
gtgaacgcctatgtgcgctcgctcaccggcggcaccttcaccgcgaaggacttccgcacg
ctccggggcacgatcctcgccgcggaggcgctcgcccgcatcggcacggtcgacacgaag
tccgaccgcaagcgtgcggagcagctggccgtgcgggcgacggccgatgcgctcggcaac
accgtcgcggtcgcacgaggcagctacatcgatccgcgcgtcttcgccctgtatggccgc
ggcaagctgctcgacctgggtgtgtcgcccgagtcggcgatccgctcgctcatccagggg
ccgtag
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