KEGG   Methanothermobacter tenebrarum: MTTB_10320
Entry
MTTB_10320        CDS       T08102                                 
Name
(GenBank) RNA-binding protein
  KO
K12589  exosome complex component RRP42
Organism
mtee  Methanothermobacter tenebrarum
Pathway
mtee03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mtee00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MTTB_10320
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mtee03019]
    MTTB_10320
Messenger RNA biogenesis [BR:mtee03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     MTTB_10320
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     MTTB_10320
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-ProteinID: BDH79653
UniProt: A0ABM7YED8
LinkDB
Position
complement(959303..960112)
AA seq 269 aa
MDIVPEIIRENIINLINKKERADGRALDEFREIFIETGVIRKAEGSARVKLGNTQLIVGI
KPQIGEPFPDTPGTGIIITNSELLPMASPTFEPGPPDERSIELSRVVDRCIRESNMLNLE
KLCLVEGSSVWLLFIDLHIIDYDGNLFDAAVLATVAALRDTKLPTAKIEEEEIILDYDNP
QPLPLEDTTLMCTFAKIGDQMILDPSLDEEEILTARLSIGMRSDGTICAMQKGGEGPLTK
EDILKAINITKEKIPQLIEELDKNIPQTR
NT seq 810 nt   +upstreamnt  +downstreamnt
atggacatagtacccgagatcatccgcgagaatataatcaacctcataaacaaaaaagaa
agagctgatgggagagcattagacgaattcagggaaatattcatagaaacgggagtgata
agaaaagcggaaggttcggcgagagtaaaactcggcaacacccagttaatcgtaggcata
aaaccccaaatcggagaaccattcccagacaccccaggaacgggtatcatcataacaaat
tctgagctactgccaatggcatcaccaacattcgaaccaggaccaccagacgaaagatca
atcgaactctcaagggtcgtggaccgttgcataagagaaagcaacatgctcaacctggaa
aaactatgcctagtagaaggcagcagcgtatggctactattcatagacctgcacatcata
gactatgacggaaacctattcgacgcagcagtactagcaacagtagcagccctaagagac
acgaaactccccacagcaaaaatagaagaagaggagataatattagactatgataaccca
caaccactacccctcgaggacacgacgctaatgtgcacattcgcaaaaataggagaccag
atgatactcgacccatcactagatgaggaggaaatactcacagcaagactatcaatagga
atgcgatcagacgggacaatctgcgccatgcaaaaagggggagaaggacccctaaccaaa
gaggacatcctaaaagccataaacattacaaaggagaaaataccccaactcatagaagaa
ctagacaaaaacataccacaaacaaggtga

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