Micromonospora terminaliae: GCE86_04580
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Entry
GCE86_04580 CDS
T06293
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mtem
Micromonospora terminaliae
Pathway
mtem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mtem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GCE86_04580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtem03019
]
GCE86_04580
03400 DNA repair and recombination proteins [BR:
mtem03400
]
GCE86_04580
Enzymes [BR:
mtem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GCE86_04580
Messenger RNA biogenesis [BR:
mtem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GCE86_04580
DNA repair and recombination proteins [BR:
mtem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GCE86_04580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
DUF3553
PcrA_UvrD_tudor
HEM4
HRDC
Motif
Other DBs
NCBI-ProteinID:
QGL46391
LinkDB
All DBs
Position
complement(1010761..1012392)
Genome browser
AA seq
543 aa
AA seq
DB search
MKLTRHSTTLRRAAKSLFGWTALRPNQLAAMRAVMKRRDALVVLPTGAGKSAIYQIPASL
IPGPTVVISPLLALQQDQIAALNERQRPELRAVRISSDESAAQQAEAIAEIRAGRAEFLF
ITPEALSNPERLAEVRALKPALVAIDEAHCISAWGHDFRPDYLALGHLIEGIGRPPVVAL
TATASPPVRDDIVARLRLRDPEVVVSGLDRPNLFLEVAHCPTDDYRWRRLVALLRDDERP
GIIYVPTRRAAEELAQRLTDAGFPAQYYHGGMPTGARNELHEAFLADQVPIMVATSAFGM
GIDKPNIAWVVHMALRDSPDSYFQEIGRAGRDGAPARVLLLWRAEDVGLQRYFSGGLPDE
KELAELAALLRKQARTKKELRELTGLGPRKLGQYLSLLEQVGAAEPRARQRIAAPRYAPA
AAESGRAALAEAERQQTVTRSRTDMMRAFAETTGCRGQALLAYFGEQMNEVCGHCDNCHA
GTSVAADGAVGPFPVHSQVRHPEWGAGLVLSYEEDRMTVLFDEVGYKTLSVRVVSEQGLL
ELD
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaccaggcactcgacgaccctgcggcgcgcggccaagagcctcttcggctgg
accgccctccggccgaaccagctggccgccatgcgggcggtcatgaagcgccgcgacgcc
ctggtggtgctccccaccggcgcgggcaagtcggcgatctaccagatcccggcgagcctg
atccccggtcccacggtggtcatctccccgctgctcgccctccagcaggatcagatcgcc
gcgctcaacgagcggcagcgcccggagctgcgggcggtccggatcagctccgacgagagc
gcggcccagcaggccgaggcgatcgcggagatccgggcgggccgcgccgagttcctgttc
atcacgccggaggcgctgagcaacccggagcggctggccgaggtacgcgcgctcaagccg
gcgctggtcgcgatcgacgaggcgcactgcatctccgcctgggggcacgacttccgcccg
gactacctggcgctcggccacctcatcgagggcatcggccggccgccggtggtggcgctc
accgcaaccgcctccccgccggtgcgcgacgacatcgtcgcccggctgcggctgcgcgac
cccgaggtggtggtgtcggggctggaccggcccaacctcttcctggaggtggcccactgc
cccaccgacgactaccggtggcggcggctggtcgcgctgctccgcgacgacgagcggccg
ggcatcatctacgtgccgacccggcgggcggccgaggaactcgcgcagcggctcaccgac
gcgggcttcccggcgcagtactaccacggcgggatgccgaccggcgcgcgcaacgagctg
cacgaggccttcctcgccgaccaggtgccgatcatggtggccacctcggcgttcggcatg
ggcatcgacaagccgaacatcgcgtgggtggtgcacatggcgctgcgcgactcgccggac
agctacttccaggagatcggccgggccggccgggacggggcgcccgcccgggtgctgctg
ctctggcgcgccgaggacgtcggtctccagcggtacttcagcggcggcctgcccgacgag
aaggagctggcggaactcgccgccctgctgcgcaagcaggcccgcaccaagaaggagctg
cgcgagctgaccggcctcgggccgcgcaagctcggccagtacctgtccctgctggagcag
gtgggcgccgcggaaccccgggcccggcagcggatcgccgccccccggtacgccccggcg
gccgccgagtccggccgcgccgcgctcgccgaggcggaacgccagcagacggtgacccgg
tcgcggaccgacatgatgcgcgccttcgcggagaccaccggctgccgggggcaggcgctg
ctggcgtacttcggcgagcagatgaacgaggtctgcgggcactgcgacaactgccacgcc
ggcaccagcgtcgccgcggacggcgcggtcgggccgtttcccgtgcacagccaggtccgc
cacccggagtggggtgccggtctggtgctgagctacgaggaggaccggatgacggtgctc
ttcgacgaggtgggctacaagacgctgtccgtccgcgtggtgtccgaacaggggctgctg
gagctggactag
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