Micromonospora terminaliae: GCE86_13140
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Entry
GCE86_13140 CDS
T06293
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mtem
Micromonospora terminaliae
Pathway
mtem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mtem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GCE86_13140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtem03019
]
GCE86_13140
03009 Ribosome biogenesis [BR:
mtem03009
]
GCE86_13140
Enzymes [BR:
mtem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GCE86_13140
Messenger RNA biogenesis [BR:
mtem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GCE86_13140
Ribosome biogenesis [BR:
mtem03009
]
Prokaryotic type
rRNA helicases
GCE86_13140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
WSD
Motif
Other DBs
NCBI-ProteinID:
QGL47887
LinkDB
All DBs
Position
2925885..2927684
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AA seq
599 aa
AA seq
DB search
MSSAPTPTDPAHSADDDAAAFADLGLRTELLKALSVLGYEEPTPIQREAIPPLLAGQDLL
GQAATGTGKTAAFALPLLQRMPDDRSGGDPVSLVLVPTRELAVQVSEAFHRYGRDLGARV
LPIYGGQPIGRQLRALDAGVDVVVATPGRALDHIARGTLRLGALATVVLDEADEMLDMGF
AEDIEAILEHAPAGRQTVLFSATMPARIDGLARQHLTDPVRIQIERERPVAGEAPRVRQS
AYIVARAHKPAALGRVLDVESPTAAIVFCRSREEVDRLTETMNGRGYRAEALHGGMSQEQ
RDRVMGRLRAGTADLLVATDVAARGLDVEQLTHVVNYDVPSAPESYVHRIGRVGRAGREG
VAITLAEPREHRMLKTIERVTGQRITVDKIPTVADLRTRRLELTQAALRESLLEDDLEPF
RAIVESLTDEFDLVEVALAAVRLAHEATLPGTADEDEEIPQVAVRPTREPRPGYDSRDRR
GGARPRSGGTTQVFIGLGRRAGVRPQDLVGAITGETGVSGRDIGSIEIADRFSLVEVPYG
VADEVIQGLRGSTIKGRKATVRRDRDGDGGGERRFDGDRRERRGRDGDGGERRERRDRW
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgagttccgcaccaaccccgaccgatcccgcccactccgccgacgacgacgccgccgcc
ttcgcggacctcggactgcgcaccgagctgctgaaggcgctgtccgtcctcggctacgag
gagccgaccccgatccagcgggaggcgatcccaccgctgctcgccggccaggatctgctc
gggcaggcggcgaccggcaccggcaagaccgcggcgttcgcgctgccgctgctccagcgg
atgcccgacgaccgctccggcggggaccccgtgtcgctggtgctggtgccgacgcgggag
ctggcggtgcaggtctccgaggcgttccaccgctacggccgggacctgggcgcccgggtg
ctgccgatctacggcggccagccgatcggccggcagctgcgcgccctcgacgccggtgtc
gacgtggtcgtggcgacgccgggccgggccctcgaccacatcgcccgggggaccctgcgg
ctcggcgcgctcgccacggtggtgctggacgaggcggacgagatgctcgacatgggcttc
gccgaggacatcgaggcgatcctggagcacgccccggccgggcggcagaccgtgctcttc
tcggccaccatgccggcgcggatcgacgggctggcccgccagcacctcaccgatccggtc
cgcatccagatcgagcgcgaacggccggtcgcgggcgaggccccgcgggtgcggcagagc
gcgtacatcgtggcgcgggcgcacaagccggcggccctgggccgggtgctggacgtggag
tcgccgaccgcggcgatcgtgttctgccggagccgggaggaggtggaccggctcaccgag
accatgaacggccgcggctaccgggccgaggcgctgcacggcgggatgagccaggagcag
cgcgaccgggtgatgggccggctgcgtgcgggcaccgccgacctgctcgtggccaccgac
gtggcggcccgcgggctggacgtggagcagctcacccacgtggtcaactacgacgtaccg
tcggcccccgagtcgtacgtgcaccggatcggccgggtgggccgggccgggcgggagggc
gtggccatcaccctggccgagccgcgtgagcaccggatgctcaagaccatcgagcgggtc
accggccagcggatcacggtcgacaagatccccacggtggcggacctgcgtacccggcgg
ctggagctgacccaggcggcgctgcgggagtcgctgctcgaggacgacctggagccgttc
cgggcgatcgtcgagtcgctgaccgacgagttcgacctcgtggaggtcgcgctggccgcg
gtgcgactggcccacgaggccaccctgcccggcacggccgacgaggacgaggagatcccg
caggtcgcggtccgcccgacccgggagccccgaccggggtacgacagccgggaccggcgc
ggcggcgcgcgtccccgctcgggcggcaccacacaggtgttcatcggcctgggccggcgc
gccggggtacgcccgcaggacctggtcggggcgatcaccggcgagaccggggtgagcggc
cgggacatcggctcgatcgagatcgccgaccggttctccctggtcgaggtgccgtacggg
gtcgccgacgaggtgatccaggggctgcggggcagcaccatcaagggccgcaaggccacg
gtgcgccgcgaccgggacggcgacggcggcggcgagcgccgcttcgacggcgaccgccgg
gagcggcgcggccgcgatggcgacggcggcgagcggcgggagcgccgggaccgctggtga
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