Micromonospora terminaliae: GCE86_17105
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Entry
GCE86_17105 CDS
T06293
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mtem
Micromonospora terminaliae
Pathway
mtem03030
DNA replication
mtem03430
Mismatch repair
mtem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mtem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GCE86_17105
03430 Mismatch repair
GCE86_17105
03440 Homologous recombination
GCE86_17105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mtem03032
]
GCE86_17105
03400 DNA repair and recombination proteins [BR:
mtem03400
]
GCE86_17105
Enzymes [BR:
mtem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GCE86_17105
DNA replication proteins [BR:
mtem03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GCE86_17105
DNA repair and recombination proteins [BR:
mtem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GCE86_17105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
QGL48591
LinkDB
All DBs
Position
3786010..3787767
Genome browser
AA seq
585 aa
AA seq
DB search
MTRADYVQEALAGLDRVAGTGVDPALPLYATTFVVVDLETTGGAPDGGGITEIGAVKVRG
GEELGVLATLVNPGVPIPPFITVLTGITQAMLLPAPPIEQVLPSFLEFIADTVLVAHNAP
YDVGFLKAACAKHGYRWPNPRVLDTAALARRVLTRDEVPNRKLGTLAAYFRTATQPTHRA
LDDAKATVDVLHGLIGRLGGHRVDTVGEAIEFARAVTPTQRRKRHLAEGLPKVPGVYIFR
AADDRPLYVGTSGDIATRVRSYFTAAEKRARISEMLAAAERVEAVECAHSLEAEVRELRL
IAAHAPPYNRRSKYPERQVWLKLTDEAYPRLSIVRDLAPTDSAYLGPFRSKQAAELAAAG
FHDAVPLRQCTHRLSRRTTMPACALAELGRCPAPCEHRITPEEYDHRAAVPFRTATRDDP
QVVVDALLARIEVLSAGRRYEEAAVVRSRLAAVLRAAVRMQRLAALTGIAELAAARPAAR
GGWELALVRHGRLAGAGVSPPGVHPRPTITAIRATAETVLPGHGPVPAATAEETERILSW
LERPETRLVEMSSGWASPVAGAGRFRDLLTKAENGASRQLSTERP
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcgagcggactacgtccaggaggccctggccggcctggaccgggtggcgggcacg
ggggtcgaccccgcgctgccgctctacgcgaccaccttcgtggtggtcgacctggagacc
accggcggcgcgccggacggcggcgggatcaccgagatcggcgccgtgaaggtgcgcggc
ggcgaggagctgggcgtgctcgcgaccctggtcaacccgggggtcccgatcccgccgttc
atcaccgtgctgaccgggatcacccaggccatgctgcttcccgcgccaccgatcgagcag
gtgctgccgagtttcctggagttcatcgccgacaccgtgctggtggcccacaacgccccc
tacgacgtgggcttcctcaaggccgcctgcgcgaagcacggctaccgctggcccaacccg
cgggtgctggacaccgccgcgctggcccgccgggtgctcacccgcgacgaggtgcccaac
cgcaagctgggcacgctggcggcctacttccgcaccgccacccagccgacccaccgggcc
ctggacgacgccaaggccaccgtcgacgtgctgcacgggctcatcggccggctcggcggg
caccgggtcgacaccgtcggggaggccatcgagttcgcccgggcggtcaccccgacccag
cggcgcaaacggcacctcgccgagggtttgccgaaggtgccgggcgtctacatcttccgg
gccgccgacgaccggccgctctacgtcggcacctccggcgacatcgccacccgggtgcgc
agctacttcaccgccgccgagaagcgggcccggatctcggagatgctggccgccgccgag
cgcgtggaggccgtcgagtgcgcccactcgctggaggccgaggtgcgcgagctgcggctg
atcgccgcgcacgcgccgccgtacaaccggcggtcgaagtacccggagcgccaggtctgg
ctgaagctgaccgacgaggcgtacccccggctgtcgatcgtgcgcgacctcgcccccacc
gactcggcctacctcggcccgttccgctcgaagcaggcggccgagctggccgccgccggg
ttccacgacgcggtgccgctgcgccagtgcacccaccggctgtcccggcgcaccaccatg
ccggcctgcgcgctggccgagctgggtcgctgcccggcgccctgcgagcaccggatcacc
ccggaggagtatgaccaccgcgccgccgtcccgttccgcaccgccacccgggacgacccg
caggtggtggtggacgctctgctggcccggatcgaggtgctctccgccggccggcgctac
gaggaggccgcggtcgtacgcagccggctggccgcggtgctgcgcgcggcggtccggatg
cagcgcctcgccgcgctgaccggcatcgccgagctggcggccgcccgcccggctgcccgg
ggcggctgggagctggccctcgtgcgccacggccggctggccggggccggggtgtccccg
ccgggtgtccacccgcgaccgaccatcaccgccatccgggccaccgccgagacggtcctg
cccgggcacggcccggtgccggccgccacggccgaggagaccgagcgcatcctgtcctgg
ttggagcgaccggagacccggctcgtggagatgtcgtccggatgggcctcgccggtcgcc
ggtgcgggccggttccgcgacctgctgaccaaggcggagaacggcgcctcccgccaactc
tcgaccgaacgcccatga
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