Micromonospora terminaliae: GCE86_20370
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Entry
GCE86_20370 CDS
T06293
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mtem
Micromonospora terminaliae
Pathway
mtem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mtem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GCE86_20370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtem03021
]
GCE86_20370
03019 Messenger RNA biogenesis [BR:
mtem03019
]
GCE86_20370
Transcription machinery [BR:
mtem03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
GCE86_20370
Messenger RNA biogenesis [BR:
mtem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GCE86_20370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
NACHT
VWA_2
Motif
Other DBs
NCBI-ProteinID:
QGL49163
UniProt:
A0AAJ2ZH03
LinkDB
All DBs
Position
complement(4458368..4460404)
Genome browser
AA seq
678 aa
AA seq
DB search
MSDTTDVTSDVSNVAGDATTAAPTRRRRSGTGLSAMLLPELQSLAASLGISGTARMRKGE
LISAITERQGGAAAGTPRPRAEVAAAAAPAREEVHAEVREERADSERGQAPAAEATEGRT
RSRRSRAAATTAEARPAETRAEEAPAETGERAERGGDRAERGERAERGERAEGRGRERGG
ERADRGERAERTERGERTERGERTDRGERTDRGERGERNERAERGDRGERNERNDRGDRN
DRGDRNDRGQRAERNDDGDDDGEGGGRRGRRSRFRDRRRGRGERAEGGDGGGREPQVGED
DVLVPVAGIIDVLDNYAFVRTTGYLAGPNDVYVSMSQIKKYGLRRGDAITGAVRAARDGG
SEQRRDKYNPLVRLDTINGMEPDEAKRRPEFYKLTPLYPQERLRLETEPNVLTTRVIDLV
MPIGKGQRALIVSPPKAGKTMVLQAIANAITRNNPECHLMVVLVDERPEEVTDMQRSVKG
EVIAATFDRPPQDHTTVAELAIERAKRLVELGHDVVVLLDSVTRLGRSYNLAAPASGRIM
SGGIDSTALYPPKRFLGAARNIENGGSLTILATALVETGSMADTVIFEEFKGTGNAELKL
DRKIADKRVFPAIDINPSGTRKEEVLLAPEELAIVHKLRKVLHSLDSQAALDLLLDRLKQ
SRTNIEFLMQIAKSTPGE
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgacaccaccgacgtgacgtcggatgtttccaacgtcgctggcgatgccaccact
gccgcccccacacgccgtcggcgcagcggcaccggcctgtcggcgatgctgctgcctgag
ctccagagcctggccgcgtcgctcgggatctccggtacggctcgcatgcgcaagggcgag
ctgatcagcgcgatcaccgagcggcagggcggcgccgccgccggaacccctcgaccgcgg
gccgaggtcgcggccgcggccgctcccgcccgtgaggaggtgcacgccgaggtccgcgag
gagcgggccgacagcgagcgcgggcaggcgccggccgccgaggcgaccgagggccgcacc
cgcagccgccggagccgtgcggccgccacgaccgccgaggcgcggccggccgagacgcgt
gccgaggaggctcccgccgagaccggcgagcgggccgagcgcggcggtgaccgtgccgag
cgcggtgagcgggccgagcgcggcgagcgggccgagggccggggccgcgagcgcggcggc
gagcgcgccgaccgtggcgagcgggccgagcgcacggagcgcggcgagcgcacggagcgc
ggcgagcgcaccgaccgcggcgagcgcaccgaccgcggcgagcgcggcgagcgcaacgag
cgggccgagcgcggtgaccggggcgagcgcaacgagcgcaacgaccggggtgaccgcaac
gaccgcggcgaccgcaacgaccggggtcagcgcgccgagcgcaacgacgacggtgacgac
gacggcgagggcggcggccggcgcggccggcgcagccggttccgggaccgccggcgtggc
cgtggcgagcgtgccgagggcggcgacggtggcggccgcgagccgcaggtcggcgaggac
gacgtgctcgtcccggtggccggcatcatcgacgtgctcgacaactacgccttcgtccgg
accaccggctacctggccggcccgaacgacgtgtacgtctcgatgtcccagatcaagaag
tacggcctgcgccgcggtgacgcgatcaccggtgcggtccgggccgcccgcgacggtggc
agcgagcagcggcgggacaagtacaacccgctggtccggctcgacaccatcaacgggatg
gagccggacgaggcgaagcgccggccggagttctacaagctcactccgctgtacccgcag
gagcggctgcggctggagaccgagccgaacgtgctgaccacccgggtcatcgacctggtg
atgccgatcggcaagggccagcgggcgctgatcgtctcgccgccgaaggcgggtaagacg
atggtgctgcaggcgatcgcgaacgcgatcacccgcaacaacccggagtgccacctcatg
gtggtgctggtcgacgagcggccggaagaggtcaccgacatgcagcggtcggtgaagggc
gaggtcatcgcggccacgttcgaccgtccgccgcaggaccacaccacggtcgcggagctg
gcgatcgagcgggcgaagcgcctggtcgagctgggccacgacgtggtcgtgctgctcgac
tcggtgacccgcctcggccggtcgtacaacctggcggcgccggccagcggccggatcatg
tcgggtggtatcgactccaccgcgctctacccgccgaagcgcttcctgggcgcggcgcgg
aacatcgagaacggcggctcgctgaccatcctcgcgacggcgctggtggagaccggctcg
atggccgacacggtcatcttcgaggagttcaagggcaccggcaacgccgagctgaagctg
gaccggaagatcgccgacaagcgggtcttcccggcgatcgacatcaacccctccggtacc
cgcaaggaggaggtcctgctcgcgccggaggagctggcgatcgtccacaagctccgcaag
gtgctgcactcgctggactcgcaggcggcgctcgacctcctgctggaccggctcaagcag
tcccgcacgaacatcgagttcctgatgcagatcgcgaagtccaccccgggcgagtga
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