Micromonospora terminaliae: GCE86_22230
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Entry
GCE86_22230 CDS
T06293
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mtem
Micromonospora terminaliae
Pathway
mtem03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mtem00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GCE86_22230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtem03021
]
GCE86_22230
03400 DNA repair and recombination proteins [BR:
mtem03400
]
GCE86_22230
Enzymes [BR:
mtem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GCE86_22230
Transcription machinery [BR:
mtem03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GCE86_22230
DNA repair and recombination proteins [BR:
mtem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GCE86_22230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QGL49504
LinkDB
All DBs
Position
complement(4842975..4846862)
Genome browser
AA seq
1295 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPQRDWEC
YCGKYKRVRFKGIICERCGVEVTRSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFASYVVTSVDAEARHRDLSTIENEILAEKRQAENSRDSEIEKRAAKLEAD
LAELEAEGAKADVRRKVKEGGEREMRQIRDRAQREIDRLDEVLDTFRKLEPKQLVTDELL
YRELRDRFGEYFTGSMGAEAIKALVQNMDLEAEAESLRETIRSGKGQRKIRALKRLKVVA
AFQNTRNSPLGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPKLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PVVWDVLEEVIGEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHVPLSAEAQAEARILMLSSNNILKPADGKPVTMPTQDMVIGLYHLTHLTPGGQGEGR
AFSSDAEARMAYDNRELHLQTPVKIRLRGIVGVDNGAGAEPWVAPEGWVEGEPVTVETTL
GRVLFNETLPQGYRFVNYEIRKGQLSAIVNDLAERFPKVALAATLDGLKEAGFHWATWSG
VTIGMEDVIAPPRKREILDRYEKEADRIDKQYQRGLMTAEERRGELIEIWTKATNEVAKE
MDTALPQENPLWKMINSGARGNLLQLRQIAAIRGLVANPKGEIIPRPIKASYREGLSVLE
YFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTDRAIPMQIGERLDGK
LVVHEHAETSVHARTLADDIKGPDGTVVAQRGQDLNSILVDAIVAAGVETVRVRSVLTCE
SKLGVCGACYGRSLPTGKTVDVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGEDITQGL
PRVQEIFEARVPKGKAPIADTPGRIRIEDGERSRKIVVIPDDGSDEIVYDKISKRVRLRA
HDGDHVEVGEKLTEGTIDPHELLRILGPRAVQVHLTQEVQEVYRSQGVLIHDKHIEIIIR
QMLKRVTVIDSGSTEFLPGVLVDRALFESENRRLVGEGGEPAAGRPVLMGITKASLATDS
WLSAASFQETTRVLTDAAIHARSDSLIGLKENVIIGKLIPAGTGISKYRNVRVEPTEEAK
AKVYSMTGYPETDYGFGPASGQAVPLDDFDFGSYR
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgagctgcgcattggcctcgccaccgccgacgacatc
cgtcagtggtcccacggcgaggtcaagaagcccgagaccatcaactaccgcaccctgaag
ccggaaaaggacgggctcttctgcgagaagatcttcggtccgcagcgggactgggagtgc
tactgcggtaagtacaagcgggtccgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtgacccgctccaaggttcgccgcgagcggatgggtcacatcgagctggccgctccg
gtgacccacatctggtacttcaagggcgtgccgagccggctgggctacctgctggacctc
gcccccaaggacctcgaaaagatcatctacttcgcctcgtacgtcgtgacgagcgtggac
gccgaagcgcgtcaccgtgacctctcgaccatcgagaacgagatcctggccgagaagcgg
caggccgagaacagccgcgactcggagatcgagaagcgggccgccaagctcgaggccgac
ctggccgagctggaggccgagggcgcgaaggcggacgtccggcgcaaggtcaaggagggc
ggagagcgcgagatgcgccagatccgcgaccgggcccagcgcgagatcgaccgcctcgac
gaggtcctcgacaccttccgcaagctcgagccgaagcagctggtcaccgacgagctgctc
taccgcgagctgcgcgaccgcttcggcgagtacttcaccggcagcatgggcgccgaggcc
atcaaggcgctggtccagaacatggacctggaggccgaggccgagagcctgcgcgagacc
atccggtccggcaagggccagcggaagatccgggcgctcaagcggctcaaggtcgtggcg
gcgttccagaacacccgcaactcgccgctcggcatggtgctggactgcgtcccggtcatc
ccgccggacctgcgtccgatggtgcagctggacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgcgtgatcaaccggaacaaccgcctcaagcggctgatcgacctc
ggcgcgcccgagatcatcgtcaacaacgagaagcggatgctccaggaggccgtcgacgcg
ctgttcgacaacggccgtcgcggccggccggtcaccggtccgggcaaccgcccgctgaag
tcgctctccgacatgctcaagggcaagcagggccggttccgccagaacctgctcggcaag
cgcgtcgactactccggccgttcggtcatcgtggtcggcccgaagctcaagctgcaccag
tgcggcctgcccaagcagatggcgctggagctgttcaagccgttcgtgatgaagcggctg
gtggacctcaaccacgcgcagaacatcaagtccgccaagcggatggtcgagcggcagcgg
ccggtcgtgtgggacgtgctggaagaggtcatcggtgagcacccggtcctgctgaaccgg
gcgccgaccctgcaccggctgggcatccaggccttcgagccgcagctggtcgagggcaag
gccatccagatccacccgctggtctgcaccgcgttcaacgccgacttcgacggtgaccag
atggcggtccacgtgccgctgtccgccgaggcccaggccgaggcgcggatcctgatgctg
tcgtcgaacaacatcctcaagccggccgacggcaagccggtcaccatgcccacccaggac
atggtcatcggcctctaccacctcacccacctcaccccgggtgggcagggcgagggccgg
gcgttcagctcggacgccgaggcgcggatggcgtacgacaaccgtgagctgcacctgcag
accccggtcaagatccgcctgcggggcatcgtcggtgtcgacaacggcgccggcgccgag
ccgtgggtcgcgcccgagggctgggtcgagggcgagccggtgacggtggagaccaccctg
ggccgggtcctgttcaacgagacgctgccgcagggctaccgcttcgtgaactacgagatc
cgcaagggccagctctccgcgatcgtcaacgacctcgccgagcgcttcccgaaggtggcc
ctggcggccactctggacgggctcaaggaggccggcttccactgggccacctggtccggc
gtcaccatcggcatggaggacgtcatcgcgcccccgcgcaagcgggagatcctggaccgg
tacgagaaggaagccgaccggatcgacaagcagtaccagcgtggtctcatgaccgccgag
gagcgccgcggcgagctcatcgagatctggaccaaggcgaccaacgaggtcgccaaggag
atggacaccgcgctgccgcaggagaacccgctgtggaagatgatcaactcgggtgcccgc
ggtaacctgctccagctccggcagatcgcggcgatccgtggtctggtggccaacccgaag
ggtgagatcatcccgcggcccatcaaggcctcgtaccgggagggtctgtccgtgctggag
tacttcatctccacgcacggtgcccggaagggtctcgcggacaccgccctgcgtaccgcc
gactcgggttacctgacccggcgtctggtggacgtctcgcaggacgtcatcatccgcgag
gaggactgcggcaccgaccgcgccatcccgatgcagatcggcgagcggctcgacggcaag
ctggtcgtgcacgagcacgccgagaccagcgtgcacgcccggaccctggccgacgacatc
aaggggccggacggcaccgtggtggcccagcggggtcaggacctcaactcgatcctggtc
gacgcgatcgtggcggccggggtggagacggtgcgggtgcgcagcgtgctcacctgcgag
tcgaagctgggcgtctgcggtgcgtgctacggccgctcgctgccgaccggcaagaccgtg
gacgtcggcgaggcggtcggcatcatcgccgcccagtcgatcggtgagccgggtacgcag
ctgacgatgcgtaccttccacaccggtggtgtcgcgggtgaggacatcacccagggtctg
ccccgtgtccaggagatcttcgaggcccgggtcccgaagggtaaggcgcccatcgccgac
acccccggccggatccggatcgaggacggcgagcggtcccgcaagatcgtcgtcatcccg
gacgacggcagcgacgagatcgtctacgacaagatctcgaagcgggtccggctccgggcg
cacgacggcgaccacgtcgaggtcggcgagaagctcaccgagggcaccatcgacccgcac
gagctgctgcgcatcctcggcccgcgcgcggtccaggtccacctgacccaggaggtccag
gaggtctaccgctcgcagggtgtgctcatccacgacaagcacatcgagatcatcatccgc
cagatgctcaagcgggtgacggtcatcgactccggctcgaccgagttcctgccgggcgtg
ctggtcgaccgggcgctgttcgagtcggagaaccgccggctcgtgggcgagggtggcgag
cccgccgccggtcgcccggtgctcatgggtatcaccaaggcctcgctggccacggattcc
tggctgtcggcggcctccttccaggagaccacccgggtgctgacggacgcggcgatccac
gcccgcagcgactcgctgatcggcctcaaggagaacgtgatcatcggtaagctcatcccg
gccggtacgggcatcagcaagtaccgcaacgtccgggtcgagccgaccgaggaggcgaag
gccaaggtctactcgatgaccggctacccggagaccgactacggcttcgggccggccagc
ggccaggcggttccgctggacgacttcgacttcgggtcgtaccgctaa
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