Micromonospora terminaliae: GCE86_28165
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Entry
GCE86_28165 CDS
T06293
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
mtem
Micromonospora terminaliae
Brite
KEGG Orthology (KO) [BR:
mtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mtem03016
]
GCE86_28165 (thpR)
Enzymes [BR:
mtem01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
GCE86_28165 (thpR)
Transfer RNA biogenesis [BR:
mtem03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
GCE86_28165 (thpR)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
QGL50557
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All DBs
Position
6065730..6066308
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AA seq
192 aa
AA seq
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MRLFVAVYPPKPAVDDLSAQVSRLRTGAAAAAGTNVRLADPANAHLTLAFLGDVPDDRLV
DVESALGLAAQTFRDARGSSPRLRLGGGGSFGRGRFTVLWVDVRGEVDGLAVLARLIRSG
LRRARLPHDEKPFRAHLTIARPGDRIDRADVLADRETLHDYLGPEWSADELVLMRSHPGP
HPTYDRLAAWPV
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
gtgcggctcttcgtcgcggtctacccgccgaagccggcggtcgacgacctgagcgcgcag
gtgtcccggctgcgcaccggagccgccgcggcggccggcaccaacgtccggctggccgac
ccggccaacgcccacctcaccctggcgttcctgggtgatgtgcccgacgaccggctggtc
gacgtggagagcgcgctcggcctggccgcgcagaccttccgggacgcccggggcagctcg
ccgcggctgcggctcggcggcgggggcagcttcgggcgcggccggttcaccgtgctgtgg
gtggacgtgcgcggcgaggtcgacgggctggccgtgctggcccggctgatccggtccggg
ctgcgccgcgcccggctgccgcacgacgagaagccgttccgggcccacctgaccatcgcc
cgccccggcgaccggatcgaccgtgccgacgtgctcgccgaccgggagaccctgcacgac
tacctcggccccgagtggagcgccgacgagctggtcctgatgcgcagccacccgggcccc
caccccacctacgaccgcctggccgcctggccggtctga
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