Metallosphaera tengchongensis: GWK48_02560
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Entry
GWK48_02560 CDS
T06642
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
mten
Metallosphaera tengchongensis
Brite
KEGG Orthology (KO) [BR:
mten00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mten03016
]
GWK48_02560 (thpR)
Enzymes [BR:
mten01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
GWK48_02560 (thpR)
Transfer RNA biogenesis [BR:
mten03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
GWK48_02560 (thpR)
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
QKQ99422
UniProt:
A0A6N0NU44
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All DBs
Position
complement(495356..495916)
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AA seq
186 aa
AA seq
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MRLFVGIPVEDSPWLREALSLVERTGVDIKLVEPQNVHVTLAFLGEVPEGKVGLVKESLE
ELSFSPFKMAFRGMGAFPSISRPRVVWIGITEGSNEIRRMRNSLVKSLSMRRVRVEEEQF
VPHVTLGRIKGPRGVQNLALLVEQMSDRDFGEQEVREVVLFKSTLTPKGPIYEEVHRRLA
EERGAK
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
gtgaggttattcgtgggtataccagtggaggactcaccgtggctcagggaagcgctctcc
ctagtggagaggacgggggtagacatcaagttggttgaaccccaaaatgtccacgtgacc
ttagccttcctaggtgaggtccctgagggtaaagtaggactggtcaaggagagccttgag
gagctaagtttcagccccttcaagatggctttcagggggatgggggctttccccagcatt
tccagacctagggtagtgtggatagggataactgagggctcaaacgaaattaggaggatg
aggaactcactggttaaatccctgtccatgaggagggtcagggttgaggaggagcagttc
gtcccgcacgtcaccctagggaggataaaggggcctaggggcgtccaaaacttagccctc
ctggtggagcagatgtccgaccgggacttcggtgaacaggaggtcagggaagtcgtcctc
ttcaagagcaccctcacacccaaggggccgatatacgaggaggtacacagaaggctagca
gaggaaagaggagcgaaatga
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