Mycolicibacter terrae: 4434518_01243
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Entry
4434518_01243 CDS
T05465
Symbol
alkA
Name
(GenBank) Ada regulatory protein AlkA
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
mter
Mycolicibacter terrae
Pathway
mter03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mter00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
4434518_01243 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mter03000
]
4434518_01243 (alkA)
03400 DNA repair and recombination proteins [BR:
mter03400
]
4434518_01243 (alkA)
Enzymes [BR:
mter01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
4434518_01243 (alkA)
Transcription factors [BR:
mter03000
]
Prokaryotic type
Helix-turn-helix
AraC family
4434518_01243 (alkA)
DNA repair and recombination proteins [BR:
mter03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
4434518_01243 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HHH
Motif
Other DBs
NCBI-ProteinID:
SNV64389
LinkDB
All DBs
Position
1:complement(1315759..1317297)
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AA seq
512 aa
AA seq
DB search
MSSAAACHGYKVHDDFDRCYRAVQSSDARFDGWFYTAVLTTRIYCRPSCPVRPPLPQNVR
FYPSAAAAQRAGFRACKRCLPDAAPGSPQWNIRGDIVGRAMRLIADGTVDREGVTGLAGH
LGYSARQLQRLLQDEVGAGPLALARAQRAQTARILIETTGLPLGDVAFAAGFASIRQFND
TVRAVCATTPTALRQQAITRSKTRSGQNAPGAGAVSLRLPVRTPFAFEGVFGHLAACAVP
GCEEVRDGAYRRTLRLPHGNGIVSLTPAADHVRCDLVLEDFRDLTAAITRCRRLLDLDAD
PEAVVDTLTDDPELAVVVTKAPGQRIPRTVDEAELAVRVVLSQQVSIKAARTHAHRLLLA
HGEQIGDPAGGLTHVFPSVERLADIDPDQLALPRARRRTLLSLVAGLTEGTIELGAGCDW
DRARHTLLELPGVGPWTAEVIAMRGLGDPDAFPVTDLGVQVAARQLGLPDQPRALSRRAA
RWRPWRSYATQHLWTALDHAVNDWPPTSKETA
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtcggctgccgcgtgccatggttacaaggtgcacgacgacttcgaccgctgttat
cgtgccgtgcagtccagtgacgcccgcttcgacggctggttctacacggccgtgctgacc
acccggatctattgccggcccagctgtccggtgcgcccgcccctgccgcagaacgtgcgg
ttctaccccagcgcggccgccgcgcagcgggccggcttccgggcctgcaaacggtgccta
cccgacgctgcaccgggttctccgcaatggaacatccgcggcgacatcgtggggcgggcg
atgcgcttgatcgccgatggcacggtggatcgcgagggggtgaccgggctcgccggccac
ctcggctactccgcccgccagttgcagcggctgctgcaggacgaggtcggcgccggaccg
ctggcgctggcccgcgcccagcgggcgcagaccgccaggatcttgatcgagaccacgggc
ctgccgttgggtgacgtcgcgttcgcggccggctttgccagcatccgacagttcaacgac
accgtccgcgccgtgtgcgccaccaccccaacggcattgcggcagcaggcgataacccgg
tcgaagacccggtccggccagaatgcgcccggcgcaggagccgtgtcgctgcgcctgccc
gtccgcaccccgttcgcgttcgaaggggtcttcgggcacctggctgcctgcgcggttccc
ggttgcgaagaggtccgtgacggagcgtaccgacgcacgctgcgcctgccgcacggcaac
ggcatcgtcagcttgactccggccgccgatcacgtccgctgcgatttggtgctcgaggac
ttccgggacctcacggccgccatcacccgttgccggcggctgctggacctcgacgccgat
cccgaagcggtcgtcgacaccttgaccgacgatcccgagttggcggtggtcgtgaccaag
gcaccgggtcagcgcattccgaggacggtcgatgaagccgaactggcggtgcgggtggtg
ctcagccagcaggtgtcgatcaaggcggcccgtacccacgcgcatcgactcctgcttgcc
cacggtgagcagatcggtgatccggccggcgggctgacacacgtctttccctcggtggag
cgcctcgccgacatcgatcccgaccagctcgctctgccccgggcccgccggcgcaccctg
ctatctctggtcgcggggctcacagagggcaccatcgagctgggcgcgggctgcgattgg
gaccgggcccggcacactttgctggagcttcccggcgtcggcccttggacggcggaggtc
atcgcgatgcgtggtttgggcgaccccgatgcctttccggtgaccgatctgggggtgcag
gtggccgcccggcagctgggcctgccggatcagccgcgggcgctgagccggcgcgcggcc
cgctggcgcccgtggcggtcctacgccacccaacatctatggaccgcgcttgatcacgcc
gtcaacgactggcccccgacttccaaggagaccgcatga
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