Mycolicibacter terrae: 4434518_01831
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Entry
4434518_01831 CDS
T05465
Name
(GenBank) topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mter
Mycolicibacter terrae
Brite
KEGG Orthology (KO) [BR:
mter00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mter03032
]
4434518_01831
03400 DNA repair and recombination proteins [BR:
mter03400
]
4434518_01831
Enzymes [BR:
mter01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
4434518_01831
DNA replication proteins [BR:
mter03032
]
Prokaryotic type
DNA Topoisomerases
4434518_01831
DNA repair and recombination proteins [BR:
mter03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
4434518_01831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
SusD_RagB
RsdA_SigD_bd
Motif
Other DBs
NCBI-ProteinID:
SNV71242
LinkDB
All DBs
Position
1:complement(1974087..1975106)
Genome browser
AA seq
339 aa
AA seq
DB search
MRLRRSNVGAGGFRRVGRGRGFSYTDGHRPVDDPEVLARIKELVIPPAWRNVWICPHPNG
HIQAVGTDAAGRRQYLYHPQWQAERSEEKYDRVLALARLLPQWRADVLTDLRCRGLRRDR
VLAVAQQLIDRGYFRAGGEEYVQENGSFGLATLLRDHVRIRSGSVDFDYPAKSGVRRTVS
VDDPLVVRAVRSLLRAPTDIPRLLVYRTPEGWCEVRADDLNERFRELTGEQFSVKDLRTW
HGTVLAAESFAAAREPTSKTVRRREIAEVMRCVAEELGNTPAVARGSYVDPRVVEAYERG
ITIRSALNRLKTRGKTAARTLAVENATARMIRRIDRARR
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgcgcagaagtaatgtcggggccggcgggttccgccgcgtcggtcggggccgc
ggcttttcctataccgacgggcaccggccggtcgacgacccggaggtgctcgcccgcatc
aaggagttggtcattccgccggcgtggcgcaacgtgtggatctgtccgcaccctaacggg
cacattcaggccgtcggaaccgatgccgccgggcgtcggcagtatctgtaccacccgcag
tggcaggccgaacggtccgaggagaaatacgaccgggtgctggccctggccaggctgctg
ccgcagtggcgagccgatgtgctgaccgacctgcgttgccgcggactgagacgcgaccgg
gtgctggcggtggcccagcagctgatcgaccggggttattttcgcgccggcggcgaggaa
tacgtccaggagaacggcagtttcgggctggcgaccctgctgcgtgaccacgtccggatc
cgcagcggcagcgtggacttcgactatccggccaaaagcggtgtacggcggacggtgtcg
gtggacgatccgctggtggtccgggcggtgcgctcgctgctgcgtgcgccgaccgacatt
ccccggctgctggtgtaccgcacgcccgagggctggtgcgaggtacgcgccgacgacctc
aacgagcggttccgggaactgaccggcgagcagttcagcgtcaaggacctgcgcacctgg
catggcaccgtgctggcggccgaaagcttcgccgccgcccgcgagccgacctcgaagacc
gtccgacggcgggagattgcggaagtgatgcgttgtgtcgccgaggaattgggtaacaca
ccggcagtagcccgcggttcatacgtggatccgcgggtggtggaggcctacgaacggggc
atcaccatccgatcggcactgaaccggttgaaaacccgcgggaagacggccgcgcgcaca
ctggccgtagagaatgccaccgctcggatgatcaggcgcatcgaccgggcacgacgctga
DBGET
integrated database retrieval system
