Micrococcus terreus: R3I42_05045
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Entry
R3I42_05045 CDS
T09505
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mteu
Micrococcus terreus
Pathway
mteu03030
DNA replication
mteu03430
Mismatch repair
mteu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mteu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
R3I42_05045 (dnaE)
03430 Mismatch repair
R3I42_05045 (dnaE)
03440 Homologous recombination
R3I42_05045 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mteu03032
]
R3I42_05045 (dnaE)
03400 DNA repair and recombination proteins [BR:
mteu03400
]
R3I42_05045 (dnaE)
Enzymes [BR:
mteu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
R3I42_05045 (dnaE)
DNA replication proteins [BR:
mteu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
R3I42_05045 (dnaE)
DNA repair and recombination proteins [BR:
mteu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
R3I42_05045 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
WOO98924
LinkDB
All DBs
Position
complement(1094101..1097613)
Genome browser
AA seq
1170 aa
AA seq
DB search
MLDGAAKLTELFAEAERLGMDSMAITDHGYLFGAFDFWKKATDAGIKPIIGLEAYLAPGH
QHRTDKTKVRWGEQHQKGDDVSGGGAITHMTLLSKNNTGMHNLFRAASIASLDSAYAKWP
RIDRELLSTYSEGLIGTTGCPSGEIQTRLRLGQYNEAREAAAEFKDIFGAGNFYCELMQH
GLDLEKRVITDLLKLAKDLDLPLVATNDLHYTHEHDAKPHEALLAIQSGSTLLEPTYDQG
GSRFAFSGTEYYLKSPQQMRSLFSELPEACDNTLVIAEQCEVSFNTSANYMPKFPCPPGE
DETSWLIKEVTTGLAGRYPNGVPDHVRKQADYELEVIISMGFPGYFLVVADFINWAKDHG
IRVGPGRGSGAGSMVAYALKITELDPLEHGLIFERFLNPDRVSMPDFDVDFDDRRRSEVI
DYVTEKYGDERVAMIVTYGTIKTKQALKDSARVMGKPFSMGETLTKALPPAVMAKDIPLK
DIENKDAPRYGEAGEFRELVASDPESAKVFETAKGIEGLKRQWGVHAAGVIMSSEPIIDV
IPIMRRLQDGQVITQFDYPTAEGLGLIKMDFLGLRNLTIISDALENITANQGITLDLEGL
NFDDAESYALLARGDTLGVFQLDGGPMRSLLKMMKPDNFEDISATIALYRPGPMGANSHT
NYALRKNGQQEITPIHPELEEPLREILDTTYGLIVYQEQVMAIAQKVAGYSLGQADILRR
AMGKKKKSELDKQYEAFHQGMIDRGYSEAAVKALWDILLPFSDYAFNKAHSAAYGLVSYW
TAYLKAHYPAEYMAALLTSVGDDKEKMAMYLNECRHMGITVLPPDVNESSLFFTPVGKDI
RFGMAAVRNVGTNVVTAMVGAREEKGDFTSFQDFFKKVPAVVCNKRTIESMIKAGAFDSL
GYPRRALLAIHEEAVDATVVQKRQEANNQFDFFSLLDAEGDGAADAGLGIEVPDLPEWEK
KDKLGFEREMLGLYVSDHPLQGLGGILDQHADHSITSILSDDGAPDGSMVTIAGLITSLQ
RRIAKNSGNAYARCEIEDLAASMEVMFFGQVYGPIATLLAEDLVVAVRGRVQRRDDGSVT
LNAQELTIPDLSDGLTGPVTLTLPSFKATEAMVTELGNVLKVHPGTTEVRMKLTKNRSVE
ILQLSPEFRVNPNPALFGDLKVLLGPSCLD
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgctggacggtgcggccaagctcaccgagctgttcgccgaggccgagcggctgggcatg
gactccatggccatcaccgaccacggctacctcttcggtgcgttcgacttctggaagaag
gccacggacgccgggatcaagccgatcatcgggctcgaggcgtacctggccccggggcat
cagcaccgcacggacaagaccaaggtccgctggggcgagcagcatcagaagggcgacgac
gtctccggcggcggtgccatcacgcacatgacgctgctgtccaagaacaacacgggcatg
cacaacctgttccgagccgcctcgatcgcctctctggactcggcctacgccaaatggccg
cgcatcgaccgcgagctgctctccacctattcggagggactgatcggcaccaccggctgc
ccgtccggcgagatccagacccgcctgcggctcggacagtacaacgaggcccgcgaggcc
gccgccgagttcaaggacatcttcggggccgggaacttctactgcgagctgatgcagcac
gggctggacctggagaagcgggtcatcaccgacctgctcaagctggccaaggacctggac
ctgccgctggtggccaccaacgacctgcattacacgcacgagcacgacgccaagccgcac
gaggcgctgttggcgatccagtccggatcgaccctgctggagcccacctacgaccagggc
ggttcccggttcgccttctccggcacggagtactacctgaagtccccgcagcagatgcgc
tccctgttctccgagctgcctgaggcctgcgacaacaccctggtgatcgccgagcagtgc
gaggtctccttcaacacctccgcgaactacatgcccaagttcccctgcccgccgggggag
gacgagaccagctggctgatcaaggaggtcaccaccggtctggccgggcggtacccgaac
ggcgttccggaccatgtgcgcaagcaggccgactatgagctcgaggtcatcatctccatg
ggcttccccgggtacttcctggtggtggccgacttcatcaactgggccaaggaccacggc
atccgcgtgggcccgggacgtggctccggcgccggttccatggtggcctatgctctgaag
atcaccgagctggaccccctggagcatgggctgatcttcgagcggttcctcaacccggac
cgtgtctccatgcccgacttcgacgtcgacttcgatgatcgccgccgctcggaggtgatc
gactacgtcaccgagaagtacggggacgagcgcgtggcgatgatcgtcacctacggcacc
atcaagaccaagcaggccctgaaggattcggcccgtgtgatgggcaagcccttctccatg
ggggagacgctgaccaaggcgctgccgccggcggtgatggccaaggacattccgctcaag
gacatcgagaacaaggatgcgccgcgttacggcgaggccggggagttccgggagctcgtc
gcctcggatccggagtccgcgaaggtcttcgagacggcgaagggcatcgagggcctgaag
cgtcagtggggcgtgcacgccgccggcgtgatcatgtcctccgagccgatcatcgacgtc
atccccatcatgcggcgcctgcaggacggccaggtcatcacccagttcgactaccccacg
gccgaggggctcggactgatcaagatggacttcctggggctgcggaacctcaccatcatc
tccgacgccctggagaacatcaccgccaaccaggggatcaccctggacctggaagggctg
aacttcgacgatgcggagtcctatgccctcctggcccggggcgacaccctgggcgtgttc
cagctggacggcggccccatgcggtcgctgctgaagatgatgaagccggacaacttcgag
gacatctcggcgaccatcgcgctctaccggcccggacccatgggtgccaattcccacacc
aactacgccctgcgcaagaacggccagcaggagatcaccccgatccacccggagctggag
gagccgctgcgagagatcctggacaccacctacggcctgatcgtctatcaggagcaggtg
atggcgatcgcccagaaggtcgccggctactcgctgggccaggcggacatcctgcgccgg
gcgatgggcaagaagaagaagtccgagctggacaagcagtatgaggccttccaccagggc
atgatcgaccgcggctactctgaggccgccgtcaaggcgctgtgggacatcctgctgccg
ttctcggactacgccttcaacaaggcgcactcggccgcctatggtctggtctcctattgg
acggcctacctcaaggcgcactacccggcggagtacatggccgcactgctcacctccgtg
ggtgacgacaaggagaagatggccatgtacctcaacgagtgccggcacatgggcatcacc
gtgttgcctccggacgtcaacgaatcgtcgttgttcttcaccccggtgggcaaggacatc
cgtttcggcatggcggcagtgcgcaatgtgggcaccaacgtggtcaccgccatggtgggc
gcccgtgaggagaagggggacttcacctccttccaggacttcttcaagaaggtccccgcc
gtggtgtgcaacaagcgcaccatcgagtcgatgatcaaggccggtgccttcgactcgctg
ggctatccccgccgtgcgctgctggccatccacgaggaggcggtggatgccacggtggtg
cagaagcggcaggaggcgaacaaccagttcgacttcttctcgctgctggacgccgaaggc
gacggtgcggctgacgccggtctgggcatcgaggttccggacctgccggagtgggagaag
aaggacaagctgggcttcgagcgggagatgctcggcctctacgtctcggaccacccgctg
cagggactgggcggcatcctggaccagcatgcggaccactcgatcaccagcatcctctcc
gacgacggcgccccggacggctccatggtcaccattgccggactgatcacctcgctgcag
cggcgcatcgccaagaactccggcaacgcctatgcgcgctgtgagatcgaggacctcgcc
gcctcgatggaagtcatgttcttcggtcaggtctacgggccgatcgccacgctcctggct
gaggacctggtggtggcggtgcgtggccgggtccagcggcgcgacgacggctcggtcacc
ctcaacgcccaggagctgaccataccggatctctccgacggtctgaccgggccggtgacc
ctgaccctgccctcgttcaaggccaccgaggcgatggtcaccgagctgggcaatgtgctc
aaggtccacccggggaccaccgaggtgcggatgaagctgaccaagaaccgctcggtggag
atcctccagctctcgcccgagttccgggtcaacccgaatccggccctgttcggtgacctc
aaggtgctcctgggcccctcctgtctcgactga
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