Micrococcus terreus: R3I42_07505
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Entry
R3I42_07505 CDS
T09505
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mteu
Micrococcus terreus
Pathway
mteu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mteu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
R3I42_07505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mteu03021
]
R3I42_07505
03400 DNA repair and recombination proteins [BR:
mteu03400
]
R3I42_07505
Enzymes [BR:
mteu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
R3I42_07505
Transcription machinery [BR:
mteu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
R3I42_07505
DNA repair and recombination proteins [BR:
mteu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
R3I42_07505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Cluap1
Motif
Other DBs
NCBI-ProteinID:
WOO96412
LinkDB
All DBs
Position
complement(1636453..1640346)
Genome browser
AA seq
1297 aa
AA seq
DB search
MSTENSFGLMRIGLATAEEIRGWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITKVDDEARHADLPNLQAEHDQETRHLSDQRDADIAAVAGDLEKD
LAKLESEGAKAAEKKKARDAADKTMAQIRKRADAELDRMEQIWDRFKNLKVADLEGDEGL
FRAMRDKYGQYFEGSMGAEAIKQRLDTFDLQAEAEMLRETIKTGKGQRKTRALKRLKVVN
AFLTTDNSPLGMVLDAVPVIPPELRPMVQLDGGRFATSDLNNLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERFR
PQVWDVLEEVITEHPVLLNRAPTLHRLGIQAFEPQLVEGKALQLHPLVCSAFNADFDGDQ
MAVHLPLSPEAQAEARLLMLSSHNILKPSDGRAVAVPAQDMIIGLNHLTTVREDEKGAGQ
EYSTVAEAIMAFDAGELHLNAPAKIGVDGFVPSDSHPAPEGWEPGQTILLDTTLGKVLFN
ELLPEDYPWLDTEATKGSLGQLVNDLAERYPMVQTAATLDNLKDAGFHWGTWSGVTVAIS
DITSDMDKESIMEGYEEQARKVQAQYDKGLIADDERRSELIDIWNKATDEVAEAMRAGLP
RLNTINRMVSSGARGNWLQVRQIAGIRGLVANPKGEIIPRPIKSSYREGLTVLEYFIATH
GARKGLADTALKTANSGYLTRRLVDVSQDVIVREEDCGTERGLTEVIAVVNHNGELVRHE
TVENSSFARTLAVDVTSEDGTVLGQAGEAIGDVAIDAFIEAGVTEVKVRSVLTCESAVGT
CAKCYGRSMATGQLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVASADDITQGLPRIQ
ELFEARTPKGVAPISEVAGRVTIEDGEKQLRLILTPDDGSEEIAYPVLRRARLLVSDGEH
VEVGTQLVSGAVDPKQVLRVLGPRAAQKFLVQEVQDVYQSQGVGIHDKHVEVIVRQMLRR
ITVIESGDTDLLPGELTDRARFTAANRKAVSEGRQPASGRDELMGITKASLATDSWLSAA
SFQETTRVLTQAAMEGKSDPLLGLKENVIIGKLIPAGTGLDRYTKVTVDPTEEAKANLFT
GPAGYADFDYPGLDQSLTPEFHAVSLDEYGMGGDFRG
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atgtccactgaaaactcgttcggcctcatgcgtatcggcctggcgaccgcggaggagatc
cgcggttggtcgcacggcgaggtcaagaagccggaaaccatcaactaccgcaccctgaag
cccgagaaggacggactcttctgcgagaagatcttcggccccacccgggactgggagtgc
tactgcggcaagtacaagcgcgtgcgcttcaagggcatcatctgtgagcgctgcggcgtc
gaggtgacccgttccaaggtgcgccgtgagcggatgggccacatcgagctggccgcaccc
gtgacccacatctggtacttcaagggcgtcccctcgcgcttgggctacctgctggatctg
gccccgaaggacctggagaaggtcatctacttcgcggcctacatgatcaccaaggtcgac
gacgaggcccgtcacgccgacctgcccaatctgcaggccgagcacgatcaggagacccgt
cacctctccgaccagcgtgatgcggacatcgccgctgtcgccggtgacctggagaaggac
ctggccaagctggagtctgagggcgccaaggcggccgagaagaagaaggcccgcgacgcc
gcggacaagaccatggcgcagatccgcaagcgtgccgacgccgagctggatcgcatggag
cagatctgggaccgcttcaagaacctcaaggtcgccgacctggagggtgatgagggtctg
ttccgcgccatgcgcgacaaatacggccagtacttcgagggatcgatgggcgccgaggcg
atcaagcagcgcctggacaccttcgacctgcaggccgaggcagagatgctgcgcgagacc
atcaagaccggcaagggccagcgcaagacccgcgccctgaagcgtctgaaggtcgtcaac
gccttcctgaccacggacaactcgccgctgggcatggtcctggacgccgtcccggtgatc
ccgccggagctgcgcccgatggtccagctcgacggtggccggttcgccacctcggacctg
aacaacctctaccgtcgtgtgatcaaccgcaacaaccgtctgaagcgtctgctggatctg
ggtgcccccgagatcatcgtgaacaacgagaagcgcatgctccaggaggctgtggactcc
ctgttcgacaacggacgtcgtggacgccccgtcaccggaccgggcaaccgcccgctgaag
tcgctctcggacatgctcaagggcaagcagggacggttccgtcagaacctgctcggcaag
cgcgtggactactcgggccgttcggtcatcgtggtcggtcctcagctgaagctgcaccag
tgcggtctgcccaagcagatggctctggagctgttcaagcccttcgtgatgaagcgcctg
gtggatctgaaccacgcacagaacatcaagtccgccaagcggatggtcgagcgcttccgt
cctcaggtctgggatgtgctggaagaggtcatcaccgagcatccggtgctgctcaaccgt
gcacccaccctgcaccgtctgggcatccaggccttcgagccgcagctggtggagggcaag
gccctgcagctgcacccgctggtctgctcggcgttcaacgctgacttcgacggtgaccag
atggccgtgcacctgccgctgagccccgaggcccaggccgaggcgcgtctgctgatgctc
tccagccacaacatcctcaagccctctgacggccgcgctgtggccgttccggctcaggac
atgatcatcggcctgaaccacctgaccacggtgcgcgaggacgagaagggcgcgggccag
gagtactcgaccgttgcggaggccatcatggccttcgacgccggcgagctgcacctgaac
gccccggccaagatcggtgtggacggcttcgttccgtcggactcccacccggcccctgag
ggctgggagccgggtcagacgatcctgctggacaccacgctgggcaaggtgctcttcaac
gagctgctgcccgaggactacccgtggctggacaccgaggcgaccaagggctccctgggc
cagctggtcaacgacctggctgagcgctacccgatggtgcagaccgccgcgaccctggac
aacctcaaggacgcgggcttccactggggaacctggtccggtgtcaccgtggccatctcg
gacatcacctccgacatggacaaggagtccatcatggagggctatgaggagcaggctcgc
aaggtccaggcccagtacgacaagggtctgatcgccgacgacgagcgccgctcggagctg
atcgacatctggaacaaggccaccgacgaggtcgccgaggccatgcgtgccggtctgccc
cgcctgaacaccatcaaccgcatggtgtcctccggagcgcgaggcaactggctgcaggtg
cgtcagatcgccggcatccgcggcctggtggccaacccgaagggtgagatcatcccgcgt
ccgatcaagtcctcctaccgcgagggcctgaccgtgctcgagtacttcatcgcgacccac
ggtgcccgtaagggcctggcggacacggcgctgaagaccgccaactcgggttacctgacc
cgtcgactggtggatgtctcccaggacgtcatcgtccgcgaggaggactgcggcaccgag
cgtggcctgaccgaggtcatcgccgtggtgaaccacaacggcgagctggtgcgccatgag
accgtggagaactcctcgttcgcccggaccctggccgtggacgtcacctccgaggacggc
accgtcctgggtcaggccggcgaggccatcggcgacgtcgcgatcgacgccttcatcgag
gccggcgtcaccgaggtcaaggtgcgctccgtgctcacctgtgagtccgccgtcgggacc
tgtgccaagtgctacggccgttccatggccaccggccagctggtggacatcggtgaggcc
gtgggcatcatcgccgcacagtccatcggtgagcccggcacgcagctgaccatgcgtacc
ttccacaccggcggtgtggcctctgctgatgacatcacgcagggtctgccccgtatccag
gagctcttcgaggcccgtacccccaagggtgtggctccgatctccgaggtcgctggccgc
gtgaccatcgaggacggggagaagcagctgcggctgatcctcaccccggacgacggctcg
gaggagatcgcctacccggtgctgcgccgtgcgcgtctgctggtgtccgacggtgagcat
gtggaggtcggcacgcagctggtctccggcgccgtggatcccaagcaggtgctgcgcgtg
ctcggtccgcgtgctgcgcagaagttcctggtccaggaggtccaggacgtgtaccagtcg
cagggtgtgggcatccacgacaagcacgtggaggtcatcgtgcggcagatgctgcgccgg
atcaccgtcatcgagtccggcgacaccgatctgctgcccggcgagctgaccgaccgtgca
cgcttcaccgccgccaaccgcaaggccgtctccgagggtcgtcagccggcttccggtcgt
gacgagctgatgggcatcaccaaggcctcgctggccacggactcgtggctctccgccgcg
tccttccaggagaccacccgggtgctgacccaggcggccatggagggcaagtcggatccg
ctgctgggtctgaaggagaacgtgatcatcggcaagctgatcccggccggcaccggcctg
gaccgctacaccaaggtcacggtcgatcccaccgaggaggccaaggccaacctgttcacc
gggcccgccggctacgcggacttcgactacccggggctggaccagtccctgacgccggag
ttccacgccgtgagcctggacgagtacggcatgggcggagacttccgcggctga
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integrated database retrieval system
