KEGG   Micrococcus terreus: R3I42_13260
Entry
R3I42_13260       CDS       T09505                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
mteu  Micrococcus terreus
Brite
KEGG Orthology (KO) [BR:mteu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mteu03400]
    R3I42_13260
Enzymes [BR:mteu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     R3I42_13260
    5.6.2.6  RNA 3'-5' helicase
     R3I42_13260
DNA repair and recombination proteins [BR:mteu03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    R3I42_13260
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH4_Lhr WH3_Lhr DEAD WH2_Lhr Helicase_C ResIII
Other DBs
NCBI-ProteinID: WOO97437
LinkDB
Position
complement(2872556..2877784)
AA seq 1742 aa
MPTDGPTPHPETVLSRFTPATAEWFGGAFAAPTQAQIGAWDAVSTGQHALVIAPTGSGKT
LAAFLWALDGFLRQPPVRQDKPWKPAGKRAKKTEDSDGVGAEAPRAATRVLYISPLKALG
VDVERNLRAPLIGITQTARRRGEDAPDVRVGVRSGDTPARERRQLLTDPPDILITTPESL
YLMLTSQARSTLTGVETVIVDEVHAVAGTKRGAHLAVSLERLDALLAKPAQRIGLSATVE
PRSEVARFLGGIQPVQVVAPAANKSWDITVTVPVPDMTELPQASAAHDMGPGSGLQPQAS
IWPHVEERIVDLVAAHRSTIVFANSRRLAERLTGRLNEIWEERQAGPEASTGLPDDARPG
ALQDPVALGELLQDSRWSPAEANPPAGGEEPSSGSRERSGAGGQPRFGPAQLIGGSGQSA
GTSAEGSGQEFARAHHGSVSKEQRALVEEDLKSGRLRCVVATSSLELGIDMGAVEQVIQV
ESPPSVASGLQRVGRAGHQVGETSRGFFFPKHRGDLVDTAVVVERMLAGRIESLSVPANP
LDILAQQTVAASALGEIDAEEWFDLVRRSAPFSALPHSAYESVLDLLSGRYPSDEFAELR
PRVVWDREAGTLEGRPGAQRLAVTSGGTIPDRGLFGVFLAGTEDEAGAGAGTARTGGRRV
GELDEEMVYESRVGDVIVLGATSWQIQDITHDRVLVVPAFGQPGRLPFWRGDAEGRPVEL
GEAVGAFRREIAASIGAGADVGTGVERLAAAGLDAWAQDNLTAYLAEQQESTGVLPTEKT
LVVERFRDELGDWRVVLHSPFGMPVHAPWALAVGARLQARYGMDGQAMAADDGIVLRVPM
MDDEPPGAELFLFAADELDEIVTREVGGSALFAARFRENAARALLLPRRDPGKRSPLWQQ
RQRSAQLLEVARKYPQFPVILETVREVLQDVYDLPALKDLATRIEGRSVRLVETTTQAPS
PFAQSLLFGYVAQFLYEGDSPLAERRAAALSLDPGLLGELLGRAELRDLLDPTVIASVEA
DLQRLSSGRRARGLEGAADLLRLLGPLSVQETAARLQGEEGDQAAPAEVPDDGTAPSADT
SPQALPHASVEVAQGHLDRLVADRRALKVRIGGQEKYAAVEDAARLRDALGVALPMGIPV
AFIEPVADPLADVVGRYARTHGPFTPAEASAALGLGAAVVHQVLQRLSADHRVTEGEFRP
GGEEVRRPRGPLDTEWCDVEVLRRIRRRSLAALRAEVEPVEQAAYARFLADWHHLQARPG
GGSPAVLSGVDGVATVLEQLAGVPVPASAWETHVLPTRVRDYSPALLDELLAGGEFLWSG
TADAPGNDGWIAFHPAETADLTLVHAEDVEFGPLQLALVEALSGGGAWFVGPLVERAKEH
LPQDHDRPTSSDWVSALWDLVWAGRVGNDTYSPVRGLLGQGRTAHRQRSRPPRARTARLS
GTGRSGRLARLRGLTGDGMITESGEAAMSGGVALIPTDAARASGRWSLLPDPLADPTIRA
HATAEILLDRYGVITRGSVVTEETPGGFAGQYRLLTRMEEAGQVRRGYYIEHLGAAQFST
GATVDRLRGFARQDVDAASPAPGGSLDQDRHTRHGFPNDPAPWRTPEVEPDLPALALAAT
DPANPYGAALPWPEVPAGPDGVRPTGHRPGRKAGAVVVMVDGELTLYVERGGRTLLCFAE
DLTDARVLRPTAQALGWALRTARVEKMSLEKVNGLPLLGTRLAEALLAAGFYASPSGLRF
RS
NT seq 5229 nt   +upstreamnt  +downstreamnt
atgcccaccgacggtcccacaccccacccggagacggtgctctcccgcttcacccccgcc
accgcagagtggttcggcggggccttcgcggcgcccacgcaggcacagatcggggcctgg
gacgcggtctccaccggtcagcacgcgctggtgatcgcaccgacgggttcaggcaagacg
ctcgccgcgttcctgtgggcgctggacggtttcctgcggcagccgcccgtacggcaggac
aagccgtggaagcccgccgggaagcgcgcgaagaagacggaggacagcgacggggttggt
gccgaggctccccgtgctgctacccgggtcctctacatctccccgctcaaggcgctcggc
gtggacgtggaacggaacctgcgcgccccgctgatcgggatcacccagaccgcccggcgc
cggggtgaggatgccccggatgtgcgtgtgggcgtccgctccggcgacacccccgcccgc
gagcgccgccagctgctcaccgatccgccggacatcctgatcaccacgcccgagtcgctg
tacctgatgctcacctcccaggcccggtccaccctgacgggtgtggagacggtgatcgtg
gacgaggtgcacgccgtggccggcaccaagcgcggcgcacacctggcggtcagcctcgaa
cggctcgacgccctgttggccaagcccgcccagcggatcgggctctcggccacggtggag
ccccggtctgaggtggcccggttcctgggcggcatccagccggtgcaggtggtggctccg
gcggcgaacaagtcctgggacatcaccgtcaccgtgcccgtcccggacatgaccgagctg
ccccaggcctccgccgcgcacgacatgggtccagggtccggtcttcagccgcaggcctcg
atctggccccatgtggaggagcggatcgtggacctggtcgccgcgcaccgctccaccatc
gtcttcgccaactcccggcgcctggccgaacgcctcaccggccggctcaacgagatctgg
gaggaacggcaggcaggtcccgaagccagcacaggccttcccgacgacgcccgcccagga
gcgctgcaggatccggtcgcgctgggcgagcttctccaggactcgcgctggtcccccgcg
gaggcgaacccgcctgcgggaggcgaggagccgtcgtcgggaagcagggaacggagcggg
gcgggaggacagccgcgattcggcccggctcagctgatcggcggctcagggcagtcggcc
ggaacgagcgccgaggggtccgggcaggagttcgcgcgggcccatcacggctcggtctcc
aaggagcagcgggccctggtggaggaggacctgaagtccgggcggctgcggtgcgtggtg
gccacgagctctctggagctgggcatcgacatgggcgccgtggagcaggtcatccaggtg
gagtccccgccctcggtggcctcggggctgcagcgcgtgggccgtgccgggcaccaggtc
ggcgagacctcgaggggcttcttcttccccaagcaccggggggacctggtggacacggcc
gtggtggtggagcggatgctggcggggaggatcgagtcgctctcggtcccggccaacccg
ctggacatcctggcccagcagaccgtggccgccagcgccctgggcgagatcgacgccgag
gagtggttcgatctggtgcgccgttcggccccgttctccgcgctgccgcactcggcctat
gagtccgtgctggacctgctctccgggcggtacccctcggacgagttcgccgagctgcgg
ccccgcgtggtgtgggaccgggaggccgggaccctggagggccgtcccggcgcacagcgg
ctggccgtcacctccggcggcaccatcccggaccgtgggctgttcggggtgttcctggcc
ggcaccgaggacgaggccggagccggcgcaggcaccgcgcgcacgggcggccgccgggtg
ggcgagctggacgaggagatggtctacgagtcgcgcgtgggggacgtgatcgtgctcggc
gccacgagctggcagatccaggacatcacgcacgaccgtgtcctggtggtccccgcgttc
ggacagcccggacgcctgccgttctggcgcggagacgccgagggccggcctgtggaactg
ggtgaggctgtgggcgcgttccggcgggagatcgcggccagcatcggtgccggggctgat
gtcggaaccggagtcgagcggctcgccgccgccgggctggacgcctgggcacaggacaac
ctgaccgcctacctcgccgagcagcaggagtccacgggcgtgctgcccacggagaagacc
ctggtggtggagcggttccgggacgagctgggcgactggcgggtggtgctgcactccccc
ttcgggatgcccgtgcacgccccatgggcgctggccgtgggtgcgcggctgcaggcccgg
tacgggatggacgggcaggccatggccgccgacgacgggatcgtgctgcgcgtgccgatg
atggacgacgagccacccggcgccgagctgttcctcttcgccgccgacgagctggacgag
atcgtcacccgggaggtcgggggctcggccctgttcgccgcccggttccgggagaacgcc
gcccgcgccctgctgctgccccggcgggaccccggcaagcgctcgcccctgtggcagcag
cgtcagcgctccgcccagctgctggaggtcgcgcggaagtacccgcagttcccggtgatc
ctggagaccgtgcgcgaggtcctgcaggacgtctacgatctccccgcgctcaaggacctg
gccacccggatcgagggccggtccgtgcgcctggtggagaccaccacgcaggccccgagc
cccttcgcgcagtccctgctgttcgggtacgtggcccagttcctctacgagggcgactcc
ccgttggccgaacgccgcgccgccgcgctgtccctggaccccgggctgctgggcgaactg
ttgggccgggccgagctgcgggacctgctggaccccaccgtgatcgcctccgtggaggcg
gacctgcagcggctctcctcgggacgccgggcgcgcggcctggaaggtgcggccgatctg
ctgcgcctgctcggacccctgagcgtccaggagacggctgcgcgcctgcagggcgaggag
ggtgaccaggctgccccggcagaggttcccgacgacggcaccgcaccctccgcagacacc
tcaccgcaggctctgcctcacgcctcggtggaggtggcccagggccacctggaccggctc
gtggcggaccgccgtgccctgaaggtgcggatcggcgggcaggagaagtacgccgccgtg
gaggacgccgcccggctgcgggatgccctcggcgtggccctgcccatgggcatcccggtg
gcgttcatcgagccggtggccgacccgctggccgatgtggtgggacggtacgcccgcacc
cacggcccgttcaccccggccgaggccagtgccgcactcggactcggtgccgccgtggtc
caccaggtcctgcagcggctctccgcggaccaccgggtcaccgagggcgagttccgtccc
ggcggcgaggaggtccggcgtccacgcgggcccctggacaccgaatggtgcgacgtcgag
gtgctgcgccggatccgacgccggtccctggccgccctgcgcgccgaggtcgagcccgtg
gagcaggccgcctacgcgcggttcctggccgactggcatcacctgcaggcccgtcccggc
ggcggctcccccgccgtgctcagcggcgtggacggtgtggccacggtgctcgagcagctg
gccggtgtccccgtccccgcgagcgcctgggagacccacgtgctgcccacccgcgtgcgc
gactactcccccgccctgctggacgagctgctggccggcggcgagttcctgtggtccggc
actgccgatgcgccgggaaatgacggctggatcgccttccacccggccgagaccgccgac
ctcaccctggtccacgccgaggatgtggagttcgggccgctgcagctggccctggtggag
gcactgtcagggggcggcgcctggttcgtcggtccgctggtggagcgcgccaaggagcac
ctgccgcaggaccacgaccgccccacctccagcgactgggtgtccgccctgtgggatctg
gtctgggccggacgggtgggcaatgacacctactcccccgtgcgcggactgctcggccag
ggccgcaccgcccaccggcagcgctcccggccgccccgggcccgcactgctcggctcagc
gggaccggtcgatccgggcgcctggcccggctgcgcggactgaccggggacgggatgatc
accgagtccggggaggcggcgatgagcggcggggtggccctgatccccacggacgccgcc
cgcgcctccggacggtggtccctgctgcccgatcctctggctgaccccaccatccgggcc
cacgccaccgcggagatcctgctggaccgctacggagtgatcacccgcgggtccgtggtg
accgaggagacccccggcgggttcgccggacagtaccgcctgctcacccgcatggaggag
gccggacaggtccgccgcggctactacatcgagcacctcggcgccgcccagttctccacc
ggcgccacggtggaccggctgcgcggcttcgcccggcaggacgtggatgcggcctccccc
gcccccggaggatccctcgaccaggaccggcacacccggcacggtttcccgaacgatccc
gcgccctggcgcacacccgaggtcgagccggacctgcccgcgctggccctggccgccacg
gacccggccaacccgtacggggcggccctgccgtggccggaggtccccgcggggccggat
ggcgtgcgccccaccggccaccgcccaggccggaaggcgggtgccgtcgtcgtgatggtg
gacggggaactgacgctctatgtggaacgcggcggccgcaccctgctgtgtttcgccgag
gacctcacggatgcccgcgtgctccgtcccaccgcgcaggcactgggctgggccctgcgc
accgcacgggtggagaagatgtccctggagaaggtcaacgggctgcccctgctgggcaca
cgcttggccgaggctctgctggccgccgggttctacgcctccccctccggcctgcgcttc
cgcagctga

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