Micrococcus terreus: R3I42_13890
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Entry
R3I42_13890 CDS
T09505
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
mteu
Micrococcus terreus
Pathway
mteu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mteu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
R3I42_13890
09124 Replication and repair
03420 Nucleotide excision repair
R3I42_13890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mteu03021
]
R3I42_13890
03400 DNA repair and recombination proteins [BR:
mteu03400
]
R3I42_13890
Enzymes [BR:
mteu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R3I42_13890
Transcription machinery [BR:
mteu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
R3I42_13890
DNA repair and recombination proteins [BR:
mteu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
R3I42_13890
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
WOO97542
LinkDB
All DBs
Position
complement(3017779..3019413)
Genome browser
AA seq
544 aa
AA seq
DB search
MSDGPLIVQSDRTVLLEVDHPQSSEARHALASFAELERAPEHIHTYRITDLGLWNARAAG
VDAEQVLDVLLTHSRYPVPHTLLVDIADIMSRYGRLRLENDPVHGLVMRTDDHPVMEEVL
HARTIREIFGPRLDGETVVVPGSERGRLKQALLKLGWPAEDLAGYVDGTPHPIALTEDDW
QLRPYQQMAVENFWAGGSGVVVLPCGAGKTLVGAAAMATSSTTTLILVTNTVSARQWKDE
LLRRTSLTEAEIGEYSGTVKEVRPVTIATYQVLTSRRGGIYPHLELVNEHDWGLIVYDEV
HLLPAPIFRMTADLQARRRLGLTATLVREDGRESEVFSLIGPKRYDAPWREIEAQGYIAP
AECVEVRVELPRDDRVAYAMAEDSDRYRYSAGSDVKLPVIRRIVDRHPGEQVLVIGQYLD
QLEEIGELLGAPVLTGKTPVRQRQRLFDEFRTGDLPVLVVSKVANFSIDLPEASVAIQVS
GSFGSRQEEAQRLGRLLRPKQDGRTAHFYTVVARDTVDQEYAQKRQRFLAEQGYAYSILD
AEDL
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgggccgctgatcgtgcagtccgaccgcaccgtgctgctggaggtggaccac
ccgcagtcctccgaggcacgtcatgccctggcctccttcgccgagctcgagagggctccc
gagcacatccacacctatcggatcaccgacctgggcctctggaacgcccgggccgccgga
gtggacgccgagcaggtcctggatgtgctgctgacccactcgcgctacccggtgccgcac
accctgctggtggacatcgccgacatcatgagccggtacgggcgcctgcgcctggagaac
gacccggtgcacggcctggtcatgcgcaccgacgaccacccggtgatggaggaggtcctg
catgcccggacgatccgcgagatcttcggtcctcgtctggacggagagaccgtggtggtc
cccggttcggagcggggccggctcaagcaggcgctgctgaagctgggctggcccgccgag
gacctggccggctatgtggacggcaccccgcatccgatcgcgctcaccgaggacgactgg
cagctgcgcccctatcagcagatggcggtggagaacttctgggccggaggctccggcgtc
gtcgtgctgccctgtggtgccggcaagaccctggtgggcgccgccgccatggccacctcc
agcaccaccacgctgatcctggtgaccaacaccgtctcggcgcggcagtggaaggacgag
ctgctgcgccgcacctcactgacagaggccgagatcggagagtactccggcacggtgaag
gaggtccgccccgtcaccatcgccacctaccaggtcctcacctcgcggcggggcggcatc
tacccgcacctggagctggtcaacgagcatgactggggcctgatcgtctatgacgaggtg
catctgctgccggccccgatcttccgaatgaccgctgatctgcaggcccggaggaggctg
ggcttgaccgcgaccctggtccgggaggatggccgggagtccgaggtgttctcgctgatc
ggacccaaacgctatgacgccccgtggcgggagatcgaggcccaggggtacatcgctccg
gcggagtgcgtggaggtccgcgtggagctgccgcgcgacgaccgggtcgcctatgccatg
gccgaggactcggaccgctaccggtacagcgccggctcggatgtgaagcttccggtgatc
cggcggatcgtggaccgccacccgggtgaacaggtcctggtgatcggtcagtacctggac
cagctcgaggagatcggcgagctgctgggggcgccggtcctgaccgggaagacccccgtg
cgccagcggcagcggctgttcgacgagttccgcaccggggacctgccggtgctggtggtg
tccaaggtggccaacttctccatcgacctgcccgaggcctcggtggccatccaggtctcc
gggtccttcggctcccgccaggaggaggcccagcggctgggccggctgctgcggcccaaa
caggacggtcggaccgcgcacttctacacggtggtggctcgggacacggtggatcaggag
tacgcgcagaagcggcagcggttcctggccgagcagggctacgcctactccatcctggac
gccgaggacctctga
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