Microvirga terrae: HPT29_000460
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Entry
HPT29_000460 CDS
T09145
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mtez
Microvirga terrae
Pathway
mtez03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mtez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPT29_000460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtez03400
]
HPT29_000460
Enzymes [BR:
mtez01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HPT29_000460
DNA repair and recombination proteins [BR:
mtez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HPT29_000460
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
UVF19669
UniProt:
A0ABY5RTM4
LinkDB
All DBs
Position
97817..99373
Genome browser
AA seq
518 aa
AA seq
DB search
MSLHRITLKAGADLDGFRRAVRWLVAEELAPQHVVFGADEAPALFGQDVAGDAPAISIPK
GVARLIEPVVCHTDPERYALLYQLVWRVLNGERDLLEIASDPLVHRIDLMARSVRRDLHK
MHAFVRFRRMDGGDPAHRAEKWSRFSAPNDAQLEERSIGLIPKMEPTFGSDAVERFAAWF
EPEHFILEAAAPFFVDRFRSMDWTILTPIGSVRWDRAALTFGPLGQREDAPAEDSFEEGW
RGYYESVFNPARVNPTAMRAEMPKKYWRNMPETAAIPGLIQTASRRVERMIEQEATMPTK
RTPERALEAMWDQEPKTLAELNAIIAKAGPLVPGATQAVFGEGPAHAEIVFVGEQPGDQE
DLQGRPFVGPAGKLLGKAMTEAGIDREQAYLTNAVKHFKFEQRGHRRIHAKPTAGEVKHY
RPWLMKELELVKPKLVVALGATALLALTGKATPITRSRGRARLGPYEGYVTVHPSYLLRL
PDEATKREAYEAFLNDLRRIHDLARADPETGELPLAAE
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcaccgcatcaccctcaaggctggcgccgacctcgacggcttccgccgcgcg
gttcgctggctcgtcgccgaggagctggcgccgcagcacgtcgtcttcggggccgacgag
gccccggccctgttcggccaggacgtcgcgggcgatgcgccggcgatctcgatccccaag
ggcgtggcgcggctcatcgaacccgtggtctgccacacggatccggaacgttacgccctg
ctctaccagctcgtctggcgggtgctcaacggcgagcgcgacctgctggagatcgccagc
gaccccctggtccaccggatcgacctgatggcgcgctccgtgcggcgcgacctgcacaag
atgcacgccttcgtgcgcttccggcggatggacggcggggatcctgcgcatcgtgcggag
aagtggtcccggttctccgcgcccaacgatgcgcagcttgaggaaagaagcatcggattg
atcccaaaaatggaacccacttttgggtccgatgctgtagagcgcttcgccgcctggttc
gaacccgagcacttcattctggaggcggccgcgcccttcttcgtcgaccgcttccgctcc
atggactggacgattctcacgcccatcgggtccgtgcggtgggatcgcgccgcgctgacc
ttcggcccgctggggcagcgcgaggacgcgccggccgaggacagcttcgaggagggctgg
cgcggctattacgagagcgtgttcaacccggcccgggtcaacccgaccgccatgcgggcc
gagatgccgaagaagtactggcgcaacatgcccgagaccgcggcgattcccggcctgatc
caaaccgcctcgcggcgcgttgaacggatgatcgaacaggaggccacgatgcccactaaa
cgcacccccgagcgcgctcttgaggccatgtgggatcaggagccgaagaccctggcggag
ctcaacgccatcatcgccaaggcggggccgctcgtgcccggcgccacccaggccgtgttc
ggcgaaggaccggcccatgcggagatcgtcttcgtcggcgagcagccgggcgatcaggag
gacctgcagggacgtcccttcgtgggacccgcaggcaagctcctgggcaaggctatgacg
gaggccgggatcgaccgcgagcaggcctatctcaccaacgcggtgaagcacttcaaattc
gagcagcgaggccaccggcgcatccacgccaagcccacggccggcgaggtcaagcattac
cggccctggctgatgaaggagcttgagctggtgaagccgaagctcgtggtggcgctcggc
gcgaccgccctgctggcgctcaccgggaaggcgaccccgatcacccgctcgcgcggacgg
gcgcggctcgggccctacgagggctatgtcaccgtgcatccctcgtacctgctgcgcctc
cccgacgaggcgacgaagcgggaggcctatgaggcgttcctgaacgatctgcgccgcatc
cacgatctcgcccgggccgatccggagaccggcgagctgccgctggcggccgaatag
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