Microvirga terrae: HPT29_001420
Help
Entry
HPT29_001420 CDS
T09145
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
mtez
Microvirga terrae
Pathway
mtez00300
Lysine biosynthesis
mtez00470
D-Amino acid metabolism
mtez01100
Metabolic pathways
mtez01110
Biosynthesis of secondary metabolites
mtez01120
Microbial metabolism in diverse environments
mtez01230
Biosynthesis of amino acids
Module
mtez_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mtez00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HPT29_001420 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HPT29_001420 (dapF)
Enzymes [BR:
mtez01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
HPT29_001420 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
UVF19844
UniProt:
A0ABY5RSG6
LinkDB
All DBs
Position
complement(301676..302560)
Genome browser
AA seq
294 aa
AA seq
DB search
MSALSNSRFLKMNGLGNEITVLDLRGSAHRVSASEARAIAADPRSRFDQLMVLHDPVTPG
TDAYMRIYNTDGSESGACGNGTRCVAWAMTTDPIMSRPVEGDLVLETKAGLLPVERVSDT
VFTVDMGPPRLAWNEIPLRDPFPDTRTIAVDTTLPDAPELRAPSAVGMGNPHAIFWVENA
QAYDLSAIGPVFEHDPAFPERANISFAQVTGPEHISLRVWERGAGATRACGSAACATLVA
ASRKGLTGRKAVIALPGGDLVIEWRESDDHVLMTGPTELEHEGTFSPSLFTEVA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccctttcgaacagccgcttcctgaaaatgaacggtctcggcaacgagatcacc
gtgctcgacctgcgcggctccgcccaccgcgtaagcgcttcggaagcgcgcgccatcgcg
gccgacccgcgctcgcgcttcgaccagctgatggtgctgcacgatccggtgacgccgggc
accgacgcctatatgcggatctacaacaccgacggctcggaatccggtgcctgcggcaac
ggcacccgctgcgtcgcctgggcgatgacgacggatccgatcatgagccgcccggtcgag
ggtgacctggtgctggaaaccaaggccgggctgctgccggtggagcgcgtctcggacacg
gtcttcaccgtcgacatgggcccgccgcgccttgcctggaacgagattcccctgcgggat
cctttccccgatacccgaacgatcgccgttgacacgaccctgcccgacgcacccgagctg
cgggccccctcggcggtcggcatgggcaatccgcacgcgatcttctgggtcgagaacgcc
caggcctacgatctttccgccatcggcccggtgttcgagcacgacccggccttcccggag
cgcgccaacatctccttcgcccaggtgaccggcccggaacacatcagcttgcgggtctgg
gagcggggagcgggcgccacccgggcctgcgggtccgcggcctgcgcgaccctcgtggcg
gcttcccgcaaggggctgacaggccgcaaggccgtgatcgcgcttcccggcggcgacctc
gtcatcgaatggcgggagagcgacgaccatgtcctgatgaccggcccgaccgagctggaa
cacgagggcaccttctccccgtccctgttcaccgaggtggcctga
DBGET
integrated database retrieval system