Microvirga terrae: HPT29_002580
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Entry
HPT29_002580 CDS
T09145
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
mtez
Microvirga terrae
Brite
KEGG Orthology (KO) [BR:
mtez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtez03021
]
HPT29_002580
Transcription machinery [BR:
mtez03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HPT29_002580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
KORA
HTH_3
HTH_31
UCR_14kD
HTH_11
Motif
Other DBs
NCBI-ProteinID:
UVF20057
LinkDB
All DBs
Position
552150..553022
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AA seq
290 aa
AA seq
DB search
MGEISGVRRRFVRAAMNAPFLEREEEHLLAVRWKENRDEAALHQLTAAHMRLVIALAARF
RHYGLPMADLVQEGHVGLLEAAARFEPEREVRFSTYATWWIRASVQDYILRNWSIVRGGT
SSAQKALFFNLRRLRARLTRGGEERISSDVHAKIAEAIGVSKADVALMDARLSAPDTSLN
APVLDADPGNSAERVEFLVDNSPLPDESVSDVIDTERRVRWLQQALEVLNERELRILRAR
RLDDEQVTLEFLGDRLGISKERVRQIENRALEKLKRALVEKYPQASGAFV
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaatctcaggggttcgccgccggttcgtccgcgcagccatgaatgcacctttt
ctcgaaagggaagaggagcatcttcttgccgtgcgctggaaagagaaccgcgatgaagca
gcacttcatcaactgactgctgcccatatgcgcctcgtcatcgcgctggcagcccgtttc
cggcactatggcctgcccatggccgatctcgttcaggaaggccatgtgggtcttctcgaa
gccgccgcccggttcgagcccgaacgggaagtccgcttctcgacctatgcgacttggtgg
atccgtgcctccgtgcaagattacatccttcgcaattggtcaatcgttcgcggcggaacg
agttccgcccagaaggcacttttcttcaatctgcgccgcctgcgtgcccgcctgacccgt
ggcggcgaggagcgcatctcgtccgacgtgcacgcgaagatcgccgaggcgatcggtgtt
tccaaagcggacgtcgctctcatggatgcccgcctgtccgcacccgacacgtccctcaat
gcgccggtcctggacgcggatccgggcaactccgccgagcgcgtcgagttcctcgtcgac
aacagcccgctgccggacgagagcgtcagcgacgtgatcgacaccgagcgccgcgtgcgc
tggctgcagcaggcgctcgaggttctcaacgagcgcgaattgcggatcctgcgggcccgc
cgtctcgacgatgagcaggtaaccctggaatttctgggcgacaggctcgggatctccaag
gagcgagtccgtcagatcgagaaccgggctctggaaaagctcaagcgcgccctggtggaa
aagtacccccaggcctccggggccttcgtctga
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